Detailed information on CNT3045126


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9AU11|PKS1_RUBID, E-value = 7e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524897Prunus dulcisPhaseolus vulgaris22.8138.1184.62234forward
CNT30156272Prunus dulcisPistacia vera47.4731.5883.37487forward
CNT30151821Prunus dulcisPrunus persica56.1410098.26576forward

Expression of CNT3045126

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MGNFGFGLAPFLNGLGGSFFAEFWNFNNHHVLPGIKGRGHVLTHSWVLF*

>peptide 2 (68 aa)
MSTPLVVQKTKWVILDLGWPHSLMALVAASLPSFGISTTTMSCLASREGAMYSHIVGFSFRISSVKYM*

>peptide 3 (93 aa)
KGFSISGIGSAPTIIAAAPSPNKAWPTKLSRWVSLGPRKVTAVISEHTTRTRAPLLFSAKSLANRSTVPPAKHPCWYIMRRLTDERRPKSLVS*

>peptide 4 (65 aa)
MVLTHALEFFFELSFVLTVGDTEVVVRVGGLINTIGRSCSPNGQDCGRTLCPLSLANFLDGHHFL*

Sequence

>CNT3045126
AAGGGCTTCTCGATCTCGGGAATTGGGTCCGCACCCACAATAATAGCTGCTGCACCATCACCGAATAAGGCCTGGCCCACTAAACTGTCAAGGTGGGTGT
CACTGGGCCCACGGAAGGTGACCGCTGTGATCTCCGAGCACACAACGAGAACACGGGCACCCCTGTTGTTCTCGGCCAAGTCCTTGGCCAACCGGAGCAC
CGTGCCGCCGGCAAAACATCCTTGTTGGTACATCATGAGGCGCTTGACGGATGAGCGTAGGCCCAAGAGCTTGGTGAGCTGATAGTCAGCTCCAGGCATG
TCCACACCACTAGTGGTGCAAAAGACCAAATGGGTAATTTTGGATTTGGGCTGGCCCCATTCCTTAATGGCCTTGGTGGCAGCTTCTTTGCCGAGTTTTG
GAATTTCAACAACCACCATGTCCTGCCTGGCATCAAGGGAAGGGGCCATGTACTCACACATAGTTGGGTTCTCTTTTAGAATTTCTTCAGTCAAGTACAT
GTAACGCTTCTTGATCATAGATTTGTCACCTGAAAAAAGCATACACAGAAAAGTTACTTCACAGTAATTCAATGTTTCACTCCATTTGTACACAGATAAA
AAAAGGTCAAAAGAAAGATTGTTTGCCACTTTGATGACTGAACAAAATGAATTCCCATTTTGTTATATTCACAGATATGGAACTATATCATGCATAAATA
AGAACACCTTGCAATAAGAGTGTGTATATATATATATATATATATATATATATATGGTACTTACACATGCGCTGGAATTTTTCTTTGAGCTCAGTTTTGT
GCTCACTGTTGGTGATACGGAAGTAGTAGTCAGGGTAGGTGGCCTGATCAACACAATTGGGAGGAGTTGCAGTCCCAATGGCCAAGACTGTGGCCGGACC
CTCTGCCCGCTGAGCCTTGCGAACTTCCTCGACGGTCACCATTTTCTCTGATCGTCAAGAAAGGTCAAGGAGGCTAGGAGCTGGTTGTGGTGTGTTTACA
GTTGTAATGGTAAGTAAGTTTGAGAA