Detailed information on CNT3045091


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43364|EFTUB_NICSY, E-value = 3e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691921Prunus dulcisOryza sativa21.34.9884.7185forward
CNT30376649Prunus dulcisArabidopsis thaliana46.878.4879.14187forward
CNT30561448Prunus dulcisActinidia chinensis74.9439.1982.61299forward
CNT30237230Prunus dulcisBrassica oleracea53.6325.4879.91214forward
CNT3074285Prunus dulcisBrassica juncea21.5515.5291.8686forward
CNT30262296Prunus dulcisBrassica rapa21.5510.6787.2186forward
CNT30626736Prunus dulcisDaucus carota50.1322.1585.5200forward
CNT3037862Prunus dulcisCucumis melo20.815.2987.9583forward

Expression of CNT3045091

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLGTPTCLASKMCSLVCGIGPSAPETTRIAPSI*

Sequence

>CNT3045091
CATAAATCTTGTCAACCCATTCATTCTCACCACGAGTGATAGTAGGCTTGGCCATCAAAGCCTCCAAAGCTAACAAAGCAGACCCAGAAATAATAGGAAC
TTCATCACCAGGAAACTCATAAGAAGAAAGTAACTCACGCACCTCCAATTCCACAAGCTGCAGAAGCTCCTCATCATCAACCTGGTCTTGTTTGTTCAAG
AACACAACCATGTTAGGCACACCCACTTGCTTGGCCAGCAAGATGTGTTCTTTGGTTTGTGGCATTGGCCCATCAGCACCAGAAACCACAAGAATCGCAC
CGTCCATCTGAGCAGCTCCAGTGATCATGTTCTTGACATAGTCGGCGTGGCCGGGGCAGTCAACGTGGGCATAGTGCCGATTCTCAGCATCATTTCGAC