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Detailed information on CNT30450529


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XQ45|AKR3_ORYSJ, E-value = 5e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700582Saccharum spontaneumQuercus lobata22.7924.5684.6998forward
CNT3070513Saccharum spontaneumQuercus suber22.7914.3982.6598forward
CNT30101518Saccharum spontaneumOryza rufipogon2035.5483.7286forward

Expression of CNT30450529

Peptides detected in this lncRNA

>peptide 1 (53 aa)
GYMIYSLTCHVANCKQSTTRLKTEIQITLTLPIMHTQRYTCLVAFPRRQWRRL*

Sequence

>CNT30450529
GGATATATGATTTATTCGCTAACTTGCCACGTTGCAAACTGCAAGCAATCTACAACTAGACTGAAAACTGAAATACAGATAACCTTAACTCTGCCAATAA
TGCACACACAACGATATACGTGTTTAGTTGCCTTTCCAAGACGACAGTGGAGGCGTCTCTGAGTCTCTCCAGGTCTTAATGACGGTGCCGTGGTAGCGTT
CACCTTGGACACCGGCGGCATAGGACTCGAGCTCGGCCATCTCCTCCGGCGTGAGCTTCACCGACAGCGCTCCCAGGTTCTGGTTCAGGTTGGCGATCTT
TGTGGTTCCAGGTATGGGGCAGACGTCGCTCCCCTGGTGGTGAACCCAAGCCAGCGCCAGCTGCGATGGTGTGCATCCTTTTCTTGCAGCCATCTGGCTC
ACGCGCTCGAATATCAGCGCGTTCTTCTCC