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Detailed information on CNT30450505


BLAST search results

BLAST vs Swiss-Prot:
sp|P35793|PR13_HORVU, E-value = 2e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30589349Saccharum spontaneumMusa acuminata8.2824.6290.1281forward
CNT30596584Saccharum spontaneumOryza meridionalis12.0720.5683.9118forward

Expression of CNT30450505

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHGLWRVTRYFYSGNRMETIGDLSKIPTILT

>peptide 2 (41 aa)
EGIPCTPDGGNSRVLAILVMIILIIYFYLFYETRYKLSHPT*

Sequence

>CNT30450505
TGAGGGCATCCCATGCACGCCAGACGGTGGGAATTCAAGAGTGCTAGCTATCTTGGTCATGATCATTCTTATTATTTATTTTTATTTATTTTATGAAACA
CGATACAAACTGTCACACCCCACATAGAGAACATACATGTATGCACACTTCACTTAAACCTAGGTGAGTAGGTTCACAAGAAACCTAATCAACTGGTGGG
CTAAGCTTAGTTTGCGGCTTATTCAAATCGATCCGGTAGCATGTACACAATATATATATCCATCTGGACATGCATGTACGTAGTACGTATGTATGCGCAC
GTAGAATCGATTGGAACTAGCTAGCTAGGCAGTAGCTAGTAGGGTTTCTCCCCGGCGTAGTTGCCCGGCGGGTTGTAGTTGCAAGTGATGAAGACGCCAC
CGCCGTTGTAGCAGACGACGCGGGCGCAGCCGATGGCGGTGGATTTGCGCCACACAACCTGCGTGTAGTGGCCGCACACCTTCCCCGCCGCGCAGCTGTT
GCTGTTGTAGTCGTAGTTCGGCTTCTCCCCGACCCACAAGCCGACGGCGTCCGACGCCTTCCAGTCACTGCCGCCGCCCCAGAAGAGGTTCTCCCCGTAG
TGGTTGGGCCCGCCGCCGGAGTGCACGAGCCTGCAGTCGCCCTGCCGCTGCGCCGCGTAGCTGCGCGCGAAGGCGGCCACGTTCTCGTCCCACGACACCG
GGCCGACGCCGACAGCCGCGCGCGCCGCGTTGTGCGGGTTCACGAAGTCCTGCGGCGAGTTCTGGGCCGCGCATGGCGTGACGGCGGCCGCGGCCGCCGC
CATGGCCAACGCCACAGCTAGACACATAGACGAGTACTCCATTGCTAGAGAACTGGATAAAAATGAAGTTTTTGTGTGAGATGGATGCATGGGTTGTGGC
GAGTGACCAGGTATTTTTATAGTGGTAATAGGATGGAGACCATTGGCGACTTGTCAAAGATACCTACTATTCTCACTC