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Detailed information on CNT30450248


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30541469Saccharum spontaneumBrassica napus36.274.8489.1974forward
CNT30554052Saccharum spontaneumOryza glaberrima98.5323.0892.54201forward
CNT30310337Saccharum spontaneumCamelina sativa36.274.4386.4974forward

Expression of CNT30450248

Peptides detected in this lncRNA

>peptide 1 (31 aa)
VDTTRTVPFLFMSAFLIEVSKSAIVSLPIRL*

Sequence

>CNT30450248
GTGGATACTACTCGAACTGTTCCTTTTTTATTCATGTCTGCGTTTCTTATAGAGGTTAGTAAATCAGCAATAGTGTCCTTGCCCATAAGACTCTAATTCT
AGGTTCCTCCTAATTTTTCTATAATCAACATGTTTTCCCTTTTCTTTAAATTTAGGATTTTAAAGCATATACGTGAGACACATTCTACAAATTTTTTCTT
TGAT