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Detailed information on CNT30449902


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 2e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30656512Saccharum spontaneumTriticum dicoccoides20.6534.0194.54183forward

Expression of CNT30449902

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MAWTKKPNMENMARRPFLISLTLSSAKVTGSSARPNGSKYWPPG*

>peptide 2 (43 aa)
MSMHAAVSGYLKTLARTWWRRPRRCWRRGRRGGRAGSRGAPCR*

>peptide 3 (36 aa)
MQPSAPSIAHRPWITSSALFRAKASGSADSPAVSQP*

Sequence

>CNT30449902
CTACTTCCGGACAGCTTGTGTTTGTAAGAAAAATAGTAGACACAACTACATATATGGACACACCACACACCGAATCAGTTAACAACTAAAACGGAGCAGA
TGGAATTGAAGACCAAAACTAGTCCAGTACGTTTCTGAGTTCTGAGAGAGCACAAGGATATTTGCATTCGTTCATGGTACAAATGTAATGTCACAACACA
AACGAGTAGTCTACAATGTCCATGCACGCCGCCGTGTCCGGCTACCTTAAGACCCTGGCGCGAACTTGGTGGCGTAGACCCAGGCGTTGTTGGCGACGGG
GTCGTCGAGGTGGTCGAGCAGGTTCTCGAGGGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTC
TTGATCTCCTTGACCTTGAGCTCGGCGAAGGTGACGGGGTCGTCGGCGAGGCCCAACGGGTCGAAGTACTGGCCGCCGGGGTAGAGGTTGTTGCCCTCGC
CGACGCCGTCGAGGCCCATGAGGATGACCTGGAACCCCAGCACGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCGAGGTAGTCCAGCCCGCC
CTCGGAGAAGATCTGCGCGCCGGCCTTGAACCACACGGGCTCCTTGAAGTCCACGCGCACCCACTTCTCCAGCACCTCCGGGGTGATGCAGCCCAGCGCC
CCCAGCATCGCCCACCGCCCGTGGATCACCTCCAGCGCCCTGTTCCGCGCGAAAGCCTCCGGGTCCGCCGACAGCCCGGCGGTGTCCCAGCCGTAGTCGC
CGGGGAACTCGCCGGTGAGGTAGGACGGCGTCTGCGCGGAGAAGGGGCCCAGGTACTTGACGCGGTCCGGGCCGTACCACAGGTCG