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Detailed information on CNT30447360


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3010293Saccharum spontaneumZea mays31.8247.4692.26168forward
CNT30579797Saccharum spontaneumEchinochloa crusgalli18.7521.4386.8799forward

Expression of CNT30447360

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLQGLVVGGPGQPADEATVLHVRRRHLPSTKP*

Sequence

>CNT30447360
CTCATTTCATAGCAGACCTTCTCACTCTTATGCCTTGCTCTCATAGCGGGAGTAACCAAAGCGGACAGTAACATATCACGGGGTACCAACACCACCAAAT
CCAAAAGGTAGAACGGACACGAACACACGGGTAACTCAGAATCGAACGGTAACACGATACTATAGATAGATAGCTAGGATAACTTGGCCGAAGCCAGGGT
GGACCCACACATCAGTTCCTCCAGTTGCCGCCGGAGTCACCGCGGCTGCCACCGCCGTAGCCACCGCCGCCGTAGCCGCCACCGTCACGGCGCCCGCCGT
AGCCGCCACCACTGCCACCGTAGCCGCCGCCGCCTCCGTAGCCGCCGCCGCCGTCGCGGCGAAGGCATGCTCCAGGGACTCGTTGTTGGTGGCCCAGGCC
AGCCCGCCGACGAAGCAACGGTACTCCACGTCCGCCGCCGCCATCTCCCCTCCACAAAACCCTAACGAACCCTAAACCGAGGACGAGGACTTGGTAAGAG
GGGGAGGAGAAGCCAACCCACCTCTGAG