Detailed information on CNT3044735


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SUV2|PT432_ARATH, E-value = 2e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521026Prunus dulcisSetaria italica21.727.6487.27110forward
CNT30374269Prunus dulcisArabidopsis thaliana23.4725.4392.44119forward
CNT30596265Prunus dulcisOryza meridionalis17.1634.890.887forward
CNT30149311Prunus dulcisBrachypodium distachyon18.9345.0789.5896forward

Expression of CNT3044735

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MTQRDRCKQNWRARGRESRELQWVPRKRCRDLWTW*

>peptide 2 (34 aa)
MVTGSTSLKTRTRTKAREIGKGQLYIFLSRMYLL*

Sequence

>CNT3044735
CCCCAATTGAGTAAACGGCCACAGGCATGAGCGCCTTAAGCATTTGAATAAATGACACAGAGAGATAGATGTAAGCAGAATTGGAGAGCCAGAGGGAGAG
AGAGTAGAGAGCTCCAATGGGTACCACGGAAGAGATGTAGAGATCTCTGGACATGGTGACTGGCTCGACGAGCTTGAAGACGCGGACGAGGACGAAGGCG
AGGGAGATTGGGAAGGGCCAGTTGTACATCTTCTTGTCGAGGATGTATTTGTTGTAGACGATGACGGTGAAGCTGAGGAAGATCCAAATCGCGACATAGG
TGTAGGAAAGGAGGATCTTTCTGATGACGCCTTCGCTGAGAGAGCCACCTTTGCCCATTTTGGTGAAAATGGAGGTGGGTTGGTGGAGGTGGCTGTGATG
AGAGTGTAGGATAAGGTGAGAGAAGGGTAGAGAATAAGGGAAGAGGATGAAGACCGAGGGGGAGGAGGAGGAGGAGGATGAAGAGGAAGAAGGAGTCAGA
TTCAAAG