Detailed information on CNT3044723


BLAST search results

BLAST vs Swiss-Prot:
sp|P43287|PIP22_ARATH, E-value = 4e-104

BLAST vs NONCODE:
NONBRAT002539, E-value = 3e-18

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549116Prunus dulcisIpomoea triloba6.4620.7794.9259forward
CNT30375565Prunus dulcisArabidopsis thaliana8.4331.1790.9177forward
CNT3019525Prunus dulcisCitrullus lanatus7.2330.1486.3666forward
CNT30728842Prunus dulcisCorchorus capsularis10.7328.2486.7398forward
CNT3070603Prunus dulcisQuercus suber16.2138.9588.51148forward
CNT30632211Prunus dulcisVigna unguiculata13.841.4587.3126forward
CNT30712585Prunus dulcisGlycine max9.7538.0386.5289forward
CNT30590722Prunus dulcisMusa acuminata12.9226.8281.36118forward
CNT30145515Prunus dulcisMedicago truncatula6.7925.3195.1662forward
CNT30213185Prunus dulcisHelianthus annuus16.3226.9481.88149forward
CNT30365858Prunus dulcisSorghum bicolor9.0922.9384.3483forward
CNT30704435Prunus dulcisPrunus avium67.1492.7495.76613forward
CNT30644102Prunus dulcisCannabis sativa10.0821.1589.1392forward
CNT3024289Prunus dulcisPopulus trichocarpa16.2130.283.11148forward
CNT30319296Prunus dulcisAsparagus officinalis10.7322.1285.7198forward
CNT30120694Prunus dulcisCitrus clementina15.3357.3889.29140forward
CNT3065055Prunus dulcisSelaginella moellendorffii9.7524.1289.8989forward

Expression of CNT3044723

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSLQGHGSLWHFSWGQWQRRQCRQEQRYQ*

>peptide 2 (52 aa)
LVIPSFVLVVDHSSSKTSSRVDTSSSDWDGGQVNNENSKSNGKWCQDLNLRI*

>peptide 3 (38 aa)
MYKTALGSETLRAKNSPKAQAMPRMPTPPHWSPLLWDL*

>peptide 4 (61 aa)
MSFGRPSPTQHRRLHPKTGLRCTKLPSAVKPCEPRIVQRPRRCPECQRRRIGLHCSGTCSQ*

>peptide 5 (78 aa)
MGVSGISLGVSGREDSVDKNKGTNDLSSQASALVVPSSQLVGSTTILLVVCLLEGLHQPNTADCTQRLGYDVQNCPRQ*

Sequence

>CNT3044723
TTGGTCATCCCAAGCTTTGTCCTTGTTGTAGATCACAGCAGCTCCAAAACTTCTAGCAGGGTTGATACCAGTTCCAGTGATTGGGATGGTGGCCAGGTGA
ACAATGAAAACAGCAAATCCAATGGGAAGTGGTGCCAAGACCTTAATTTAAGAATATAAAAAAACATATAGGGTTAACAAAATTTTGTGGAGGGATGGAA
TCCGCAAGTTCAAATCACATAAACGAAAGTTAGTTGAAGAACAAAATAAGTCAAATTGAGTTATTAGGAGCTAATTAAAAATAGATAAGCATGGTTAATT
AGGTGATGAGCTTACAGGGACATGGGAGTCTCTGGCATTTCTCTTGGGGTCAGTGGCAGAGAAGACAGTGTAGACAAGAACAAAGGTACCAATGATCTCA
GCTCCCAAGCCAGTGCCCTTGTTGTACCCAGCAGCCAACTCGTTGGCTCCACCACCATACTCCTCGTAGTATGTCTTTTGGAAGGCCTTCACCAACCCAA
CACCGCAGATTGCACCCAAAGACTGGGCTACGATGTACAAAACTGCCCTCGGCAGTGAAACCTTGCGAGCCAAGAATAGTCCAAAGGCCCAGGCGATGCC
CAGAATGCCAACGCCGCCGCATTGGTCTCCACTGCTCTGGGACTTGTAGCCAATGACGGTCAAAACGGTGATGTAAAGGAAGAGAAGGGTGGCAACGAAC
TCAGCAATAAGAGCTCTGTAGAAAGACCATTTGGTCAGCTCCTCAGCATCAAAGAAGGGGGTTGGAGGAGGGTCCTGGTAGTCTTTGGCTGCAAACTCAC
CATGCTCAGCTCCCTCTACATCTTTAGCCATGGCTTCTTCTGTGACTAAAAATTAAATTATCTATGTGCTTGTTGTGGCTTGTGAAGTATGTGCTTTTGG
ATTGGGGCTTGGT