« Back to Prunus dulcis search


Detailed information on CNT3044715


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712713Prunus dulcisGlycine max11.5326.1193.1888forward

Expression of CNT3044715

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MEYLNVQFGYAYIDTIVEIAVHTDKMAFDYIV*

>peptide 2 (47 aa)
MIHISESGADEHIELSMWSLLAWSKTISMQTVHYTYLEELQTKASCV*

>peptide 3 (70 aa)
MLLILELNTYQLTSLGRKLYKMWKIPLFIQVKEFLIMMELWGLCPTSLQRATNYYIILKDYCNFQKTMAA*

Sequence

>CNT3044715
AACATGAGAAATACGCCATGCTAATGTGCCTTGGATGATCCACATCTCAGAATCAGGCGCTGATGAGCACATTGAACTATCCATGTGGAGCCTGCTAGCT
TGGTCAAAAACAATAAGTATGCAGACAGTACATTATACTTATCTGGAAGAGCTTCAAACCAAGGCAAGCTGTGTCTAAAGTATATTTTCCTTCATTCTTA
ATATGGAGTATCTAAATGTTCAATTTGGTTATGCATATATAGATACTATTGTAGAAATAGCCGTACACACAGACAAAATGGCCTTCGACTATATAGTCTA
AAAATATACGTATTTATTTTTATTAATATATAACAATGTGACGTGACGAGAAAAGATTTTTAAAAAAACGGTCGTGGAAGTAATTTTTCTCCAACAAATG
TTGCTGATCCTTGAGTTAAACACTTATCAGCTTACATCTCTTGGAAGAAAATTATACAAGATGTGGAAAATCCCACTCTTTATTCAGGTCAAAGAATTCT
TGATTATGATGGAGTTATGGGGTCTTTGTCCAACCAGCTTGCAAAGAGCCACCAACTACTATATTATTCTAAAGGATTATTGTAATTTTCAGAAAACGAT
GGCAGCTTAATCTTCTAAGAATTCATAGTCAATTATTCCGGTTTTGAGAGTATGTCACATATTTTATTCCTAAACTAACCCGTTCTGCCATTTGACCATT
TGTTTTAATTATAATGTTTCTCAATATTCTGGTATTTCCTATTCAACCCCTCAAGAATGCATC