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Detailed information on CNT3044711

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30676994	Prunus dulcis	Setaria viridis	79.45	75.95	89.45	379	reverse complement
CNT30524664	Prunus dulcis	Setaria italica	59.96	20.89	96.15	286	reverse complement
CNT30641660	Prunus dulcis	Nymphaea colorata	100	39.36	97.69	477	forward
CNT30536068	Prunus dulcis	Eucalyptus grandis	100.63	13.94	97.29	480	forward
CNT30513456	Prunus dulcis	Juglans regia	101.05	15.19	97.3	482	reverse complement
CNT30378667	Prunus dulcis	Arabidopsis thaliana	26	11.08	99.19	124	reverse complement
CNT30500477	Prunus dulcis	Coffea canephora	100	26.19	99.37	477	reverse complement
CNT30269781	Prunus dulcis	Chenopodium quinoa	100	16.14	96.44	477	reverse complement
CNT30730610	Prunus dulcis	Corchorus capsularis	100	44.87	98.95	477	reverse complement
CNT30381505	Prunus dulcis	Manihot esculenta	37.95	62.2	96.13	181	reverse complement
CNT30403504	Prunus dulcis	Beta vulgaris	36.27	78.28	99.42	173	forward
CNT30525072	Prunus dulcis	Phaseolus vulgaris	32.29	36.07	99.35	154	forward
CNT30632450	Prunus dulcis	Vigna unguiculata	102.52	21.99	95.91	489	reverse complement
CNT30196858	Prunus dulcis	Pisum sativum	100	25.69	95.39	477	reverse complement
CNT30503431	Prunus dulcis	Nicotiana attenuata	100	34.54	98.95	477	forward
CNT30711335	Prunus dulcis	Glycine max	77.78	94.64	95.15	371	forward
CNT3090649	Prunus dulcis	Solanum tuberosum	100	17.45	99.16	477	reverse complement
CNT30193801	Prunus dulcis	Secale cereale	101.89	34.42	94.24	486	reverse complement
CNT30291213	Prunus dulcis	Triticum aestivum	101.89	13.99	94.03	486	reverse complement
CNT30385574	Prunus dulcis	Triticum turgidum	98.95	30.69	93.43	472	forward
CNT30588765	Prunus dulcis	Musa acuminata	100.21	68.48	97.07	478	forward
CNT3087623	Prunus dulcis	Vigna radiata	39.62	90.87	98.94	189	forward
CNT30511396	Prunus dulcis	Solanum lycopersicum	68.76	35.85	94.51	328	reverse complement
CNT30554009	Prunus dulcis	Oryza glaberrima	59.96	52.48	94.06	286	reverse complement
CNT30248027	Prunus dulcis	Avena sativa	59.96	29.36	94.41	286	forward
CNT30310298	Prunus dulcis	Camelina sativa	57.65	18.03	98.91	275	forward
CNT3062651	Prunus dulcis	Arabidopsis lyrata	52.2	29.93	99.2	249	forward
CNT30266045	Prunus dulcis	Brassica rapa	51.15	55.08	92.62	244	reverse complement
CNT30612440	Prunus dulcis	Arabis alpina	47.59	100.89	96.92	227	reverse complement
CNT30600961	Prunus dulcis	Fraxinus excelsior	22.85	31.78	85.32	109	reverse complement
CNT30460907	Prunus dulcis	Saccharum spontaneum	101.89	14.59	94.44	486	reverse complement
CNT30141326	Prunus dulcis	Lolium perenne	32.91	47.29	96.18	157	reverse complement
CNT3018333	Prunus dulcis	Zea mays	101.89	17.02	94.44	486	reverse complement
CNT30655263	Prunus dulcis	Rosa chinensis	100	26.43	96.02	477	reverse complement
CNT30206293	Prunus dulcis	Helianthus annuus	100	21.71	99.37	477	reverse complement
CNT30715515	Prunus dulcis	Malus domestica golden	32.7	77.61	85.26	156	reverse complement
CNT30688464	Prunus dulcis	Triticum urartu	101.89	26.41	94.24	486	reverse complement
CNT30720907	Prunus dulcis	Triticum spelta	89.73	41.92	93.46	428	forward
CNT30596725	Prunus dulcis	Oryza meridionalis	101.89	14.08	94.44	486	reverse complement
CNT30357533	Prunus dulcis	Lactuca sativa	74.84	35.07	99.44	357	reverse complement
CNT30369364	Prunus dulcis	Oryza glumipatula	22.85	26.2	85.32	109	reverse complement
CNT30154922	Prunus dulcis	Prunus persica	100	28.24	94.55	477	forward
CNT30483432	Prunus dulcis	Chara braunii	29.56	69.12	90.07	141	reverse complement
CNT30412183	Prunus dulcis	Papaver somniferum	100	16.94	98.95	477	reverse complement
CNT30646402	Prunus dulcis	Cannabis sativa	96.44	36.36	93.91	460	forward
CNT3056240	Prunus dulcis	Amborella trichopoda	52.41	87.41	98.4	250	reverse complement
CNT30319706	Prunus dulcis	Asparagus officinalis	100.21	16.63	97.7	478	reverse complement
CNT30332807	Prunus dulcis	Dioscorea rotundata	100.21	28.93	97.49	478	forward
CNT30148090	Prunus dulcis	Brachypodium distachyon	101.89	16.73	94.24	486	forward
CNT30102893	Prunus dulcis	Oryza rufipogon	102.1	34.54	93.22	487	reverse complement
CNT30576679	Prunus dulcis	Oryza barthii	59.33	53.9	94.7	283	reverse complement

Expression of CNT3044711

Peptides detected in this lncRNA

>peptide 1 (47 aa)
LNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLVSPKLHPGHG*

>peptide 2 (29 aa)
MDRSPRFGSISSDNCPMKTRFRYGSGGFP*

>peptide 3 (35 aa)
MFYFTPRWGFFSPFPHGTTSLSVTQEYLALQGGPC*

>peptide 4 (77 aa)
MSRRLILQQARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSLARWSLLIHTGFHVSHATRVRA*

>peptide 5 (36 aa)
STHFGENQLALGSSGISPLTTTHPLILQHQSVRTST*

Sequence

>CNT3044711
CTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGG
ACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTC
GCTACGGCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCAGGGCTCCTCCCACTG
CTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTAT
TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGTCCCATGCTACTCGGGTCAGAGCGTAAGCT