Detailed information on CNT3044614


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316252Prunus dulcisCorylus avellana41.4944.0789.1156reverse complement
CNT30377597Prunus dulcisArabidopsis thaliana16.7622.2690.4863forward
CNT3084371Prunus dulcisVigna radiata20.4816.8989.6177reverse complement
CNT30410045Prunus dulcisPapaver somniferum17.8222.6492.5467reverse complement
CNT3030049Prunus dulcisTheobroma cacao24.229.6490.1191forward

Expression of CNT3044614

Peptides detected in this lncRNA

>peptide 1 (40 aa)
ASQRELVTQVGALRYWNIGPVLAGRVQVGYLLARPFQARS*

Sequence

>CNT3044614
AGCTTCGCAACGTGAGCTTGTAACCCAAGTGGGGGCTTTGAGGTATTGGAACATTGGCCCAGTATTAGCTGGTCGGGTTCAGGTTGGCTATCTTCTGGCC
CGCCCATTCCAAGCCAGGAGTTGAACCTTGTGGCTTGAGCGAAGGCTCTCGGTCACTGGGTTACTAGAGAGGAGGGCACTGCGTAAGGCTGGCTTCACAG
AGCAACGACTACCTCCCGCTCTTGGCAGTGGAAGGATAACGGGTCGGTGCCGCTTGGATCCACCATGGCCAGCTAGACTGTCCCAGTTGAACCAAAACCT
TTTTGCTCACTTTTTGTATCCTTCTATGTCTATATCTTTGTTCTGTGAGTCTGTTTCCACTAAAACCAAAGTAAAA