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Detailed information on CNT30446045


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678636Saccharum spontaneumSetaria viridis23.1224.5391.392forward
CNT30521923Saccharum spontaneumSetaria italica23.1215.7591.392forward
CNT30578989Saccharum spontaneumEchinochloa crusgalli22.3612.5295.5189forward

Expression of CNT30446045

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLQGLVVGGPGQPADEATVLHVRRRHLPSTKP*

Sequence

>CNT30446045
CGAACACACGGGTAACTCAGAATCGAACGGTAACACGATACTATAGATAGATAGCTAGGATAACTTGGCCGAAACCAGGGTGGACCCACACATCAGTTCC
TCCAGTTGCCGCCGGAGTCACCGCGGCTGCCACCGCCGTAGCCACCGCCGCCGTAGCCGCCACCGTCACGGCGCCCGCCGTAGCCGCCACCACTGCCACC
GTAGCCGCCGCCGCCTCCGTAGCCGCCGCCGCCGTCGCGGCGAAGGCATGCTCCAGGGACTCGTTGTTGGTGGCCCAGGCCAGCCCGCCGACGAAGCAAC
GGTACTCCACGTCCGCCGCCGCCATCTCCCCTCCACAAAACCCTAACGAACCCTAAACCGAGGACGAGGACTTGGTAAGAGGGGGAGGAGAAGCCAAC