« Back to Saccharum spontaneum search


Detailed information on CNT30445994


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONSLYT002586, E-value = 2e-82

Expression of CNT30445994

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRRAAVTSEEKSTCPGESIRLIRYWLPSLSPL*

>peptide 2 (29 aa)
MVTLSFCSMGHNFSFWSFMQVLMICLIGS*

>peptide 3 (49 aa)
MIRTFIPVATFPEKTRPKAKNLPLSDAGIIFETYSIRGPSGSQFLIAVA*

>peptide 4 (38 aa)
PAMICSPDSSIVQRTIGSDFARRFKPSTSLGRSEATLH*

Sequence

>CNT30445994
CCAGCAATGATATGCTCACCAGACTCTTCCATTGTACAGAGAACCATAGGATCAGACTTCGCCAGACGCTTCAAACCTTCGACTAGCTTGGGAAGGTCAG
AGGCAACCTTGCACTGAACAGCAACACGCACAACAGGAGAGACAGAGAACTTCATTGCTCTGATTGGGCATGCATCAACCTCCTTTTCATTAGTGAGTGT
AGCATTCTTCGTGATGAACTGATCCAGACCAACCATAGCAACAGTGTTACCACAAGGGACATCCTCAACTGACTCTTGTTTCTTTCCCATCCAGATAACG
GTACGCTGGACACTCTTCACATACAGATCCTTTTTCTGGCCAGGGACATAGTTGGGACCCATGATCCGAACCTTCATACCAGTAGCAACCTTCCCTGAGA
AGACGCGACCGAAGGCAAAGAACCTGCCCTTGTCAGATGCTGGAATCATCTTCGAAACATACAGCATAAGAGGACCCTCCGGATCACAGTTTCTGATAGC
AGTTGCATAGACGTCATCAAGGGGTCCCTCGTACAAGTTCTCCACACGATACTTTTGAGCCTTTGCCGGGGAAGGAAGGTGGAATATCATCATCTCGAGC
AGTGCAGTGCTAGCTGGTAGCCATGTTTGCATAACACGCTTCATCAAAGCTTTGCCAATCAATTCCTTCTCATCAGCCTTCATGGTAACATTGAGCTTTT
GCAGCATGGGCCACAATTTCTCCTTCTGGTCGTTCATGCAGGTGTTGATGATTTGCTTGATTGGCTCATAGCAGAACTGAACAAATCCTCTCTTGCAGGT
AGGAGAGCCTGTGTTCTTGGTGGTCCACTTCTTGGTGGCAGGGTCAAAGAAGTTCTCACCCCAAAGCCTCTCCATCATCTTAGCTTCATCAACTCCAAAC
TTAGATGCATACATCTTGGCAAAGTTAGTGAGGGTAAAGGCCCATCCGTGCAGGCCAGCAGAAAAAGCAACAGTCCCCTTCTCTGGGTACACTTGGACAT
CACCAAGGAGCTTATCTTCATATGTTGCCATGATGACATTGGCATTCTCAATGACACGGGAGAAAGTCTGATAAGCTTCCTCGCCCTCAACCTGAAGCTC
AAGGAAGCACCTGTCCATCTTGTTCACGGTAAGAACTGGCCTAATCCTCTCACCAAGGGCTTGGCGAAGCACAGTTTCAGTTTGCACACAGACACCTTCA
ATACAGTCAACCACCACCAGAGCACCATCGGTGATGCGAAGAGCAGCTGTGACTTCCGAAGAAAAATCAACGTGTCCAGGCGAGTCAATAAGGTTGATCA
GGTATTGGTTACCATCTCTCTCGCCCTTGTAATTCTTCAGTGACTCATCAGTCATCTCATAGTAAAGAGAGATACCAGTAGATTTGATTGTAATACCGCG
CTCTGCCTCATCTGCACGAGTATC