« Back to Saccharum spontaneum search


Detailed information on CNT30444788


BLAST search results

BLAST vs Swiss-Prot:
sp|Q75L11|H2A6_ORYSJ, E-value = 8e-45

BLAST vs NONCODE:
NONZMAT003285, E-value = 8e-56

Expression of CNT30444788

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MLGRTPPWAMVTPASSLPSSSSLRIARSTWRGMMRVFLLSLAALPASSSTSAARYSRTAAR*

>peptide 2 (59 aa)
MRPTGNCSPALTDRDTDFFLGPPALRPAAPFFAFPPAPAPLTSMAAGGCCCCCCCASRLR

>peptide 3 (47 aa)
TARKVISRMDPTNQTRSCFFCACCMYIFFSIEIQSIRSNWSQAYHCI*

>peptide 4 (55 aa)
MEEPPLSSKRREHSRPSWGTWRPSWATWAPWPPSRPPSWGGAQSGCWGGRRRGRW*

Sequence

>CNT30444788
ACAGCTAGAAAAGTAATAAGCAGAATGGATCCAACCAACCAGACTAGAAGCTGCTTCTTTTGTGCATGCTGCATGTACATTTTTTTTTCCATAGAGATAC
AATCCATTAGGAGCAACTGGTCTCAGGCATACCACTGTATCTAGTTTCTTCTATCGGTTCAGTTATGACTATATGACCCACTTACCAAATCCAGGTTCTA
TGAGAAGTTGAGCACACCTTTTGCAAGTAGCAAACTCTGGTTTCTGAAATCTTGTTGCAACCAACGAAAATGCACAGATGTACTAGTACTAGATAAACCA
TTCCAATTAGCAGCAAGAACAAGAACGTTACAGAGGTACACTAAACATGATCTAATCTAACAGGACAGCACTAATGGAGGAGCCTCCCTTGTCCTCTAAG
AGACGAGAGCACTCTAGGCCTTCTTGGGGGACTTGGCGGCCTTCTTGGGCGACTTGGGCTCCTTGGCCGCCTTCTCGGCCACCTTCTTGGGGAGGAGCAC
AGAGTGGATGTTGGGGAGGACGCCGCCGTGGGCGATGGTGACGCCGGCCAGCAGCTTGCCGAGCTCCTCGTCGTTGCGGATAGCCAGGAGCACGTGGCGC
GGGATGATGCGCGTCTTCTTGTTGTCCCTGGCCGCGTTGCCGGCGAGCTCGAGCACCTCGGCGGCGAGGTACTCGAGGACGGCGGCGAGGTAGACGGGGG
CGCCCGTGCCGACGCGCTGCGCGTACCGGCCCTTCTTGAGGTACCGCCCGATGCGGCCGACGGGGAACTGCAGCCCGGCCTTGACGGACCGCGACACCGA
CTTCTTCCTCGGCCCGCCGGCCTTGCGCCCCGCCGCGCCCTTCTTCGCCTTCCCGCCGGCTCCTGCTCCGCTCACGTCCATGGCCGCCGGCGGTTGCTGC
TGCTGCTGCTGCTGCGCTTCGAGATTGAGAG