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Detailed information on CNT30444225


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 3e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Aegilops tauschiiOryza sativa10043.1298.731104forward
CNT30677010Aegilops tauschiiSetaria viridis77.0891.5192.95851forward
CNT30177273Aegilops tauschiiSecale cereale82.3410099.45909forward
CNT30291213Aegilops tauschiiTriticum aestivum10031.7899.281104forward
CNT30225309Aegilops tauschiiHordeum vulgare65.2259.7596.11720forward
CNT30399645Aegilops tauschiiTriticum turgidum98.5547.5799.451088forward
CNT30668159Aegilops tauschiiTriticum dicoccoides64.6710096.08714forward
CNT30460907Aegilops tauschiiSaccharum spontaneum10033.13991104forward
CNT30136065Aegilops tauschiiLolium perenne56.2596.7398.23621forward
CNT3018333Aegilops tauschiiZea mays10038.6799.091104forward
CNT30713553Aegilops tauschiiMalus domestica golden47.177.1593.46520forward
CNT30627950Aegilops tauschiiDaucus carota34.5188.692.65381forward
CNT30689042Aegilops tauschiiTriticum urartu99.9138.2798.731103forward
CNT30721122Aegilops tauschiiTriticum spelta7499.3998.9817forward
CNT30364730Aegilops tauschiiSorghum bicolor36.1470.3798.5399reverse complement
CNT30596725Aegilops tauschiiOryza meridionalis95.0230.498.951049forward
CNT30705531Aegilops tauschiiPrunus avium25.3610091.43280reverse complement
CNT30574740Aegilops tauschiiOryza barthii25.3656.9199.64280forward
CNT30585638Aegilops tauschiiEchinochloa crusgalli66.3947.3598.91733reverse complement
CNT30604668Aegilops tauschiiOryza punctata39.0498.1896.29431forward

Expression of CNT30444225

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

>peptide 2 (32 aa)
MSKCIGRGAFRLRGKQPRKRGSTKRKRECRLE*

>peptide 3 (35 aa)
DHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA*

>peptide 4 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*

Sequence

>CNT30444225
CGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTTAAA
GAGTGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGG
AGCGTTCCGCCTTAGAGGGAAGCAACCGCGAAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAAT
GCCCCGAAAACCCAAGGTTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTCAA
TATTCCTGTACTACCCCTTGTTGGTACGGAGGGACGCAGGAGGTTAGGTTAGCCGAAAGATGGTTATAGGTTTAAGGACACAAGGTGACCCTGCTTTTTC
AGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAGCCCCGTGGACTAGCGATTGCTTCTCCA
CGAGGCTCATACCAGGCGCTACGGCGCTGACGTATGTAACTGATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTTCCTGTACCCGA
AACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGC
CCCCTCACAAAAGGGGGCCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCC
TGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGAACTGATGACAGGGAAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAG
GTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTG
AAGA