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Detailed information on CNT30444217


BLAST search results

BLAST vs Swiss-Prot:
sp|P11383|RBL_WHEAT, E-value = 8e-96

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201083Aegilops tauschiiPisum sativum73.519.4885.82416forward
CNT30179654Aegilops tauschiiSecale cereale10069.5398.94566forward
CNT30225281Aegilops tauschiiHordeum vulgare39.2266.2796.4222forward
CNT30565170Aegilops tauschiiActinidia chinensis48.5924.0890.55275forward
CNT30239038Aegilops tauschiiBrassica oleracea72.9733.1284.75413forward
CNT30554212Aegilops tauschiiOryza glaberrima10015.0196.11566forward
CNT302912Aegilops tauschiiZea mays89.2263.0596.24505forward
CNT30606537Aegilops tauschiiGossypium raimondii67.6722.7881.46383forward
CNT30682029Aegilops tauschiiTriticum urartu10053.6599.12566forward
CNT30595572Aegilops tauschiiOryza meridionalis58.8338.8694.29333forward
CNT30355674Aegilops tauschiiLactuca sativa59.7245.888.17338forward
CNT30100001Aegilops tauschiiOryza rufipogon44.798.0697.23253forward

Expression of CNT30444217

Peptides detected in this lncRNA

>peptide 1 (33 aa)
AFHTSQAAASSGLHLQAARIISLPSRARSRPSL*

Sequence

>CNT30444217
TCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTT
ATGAGCTTGTACACAGGCTTCTAAAGCCACTCGATTAGCTGCTGCACCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATC
GCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTTTACCGGAGTGGATATGATCTCCCCCAGACATACGCAAT
GCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGTATTGCACGGTGAATGTGAAGAAGTAGGCCATTGTCGCGGC
AATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCCTAATTCTCTTGCAAATATAGCTCTCTTAAT
CATTTCTTCACATGTACCCGCAGTCACATTCAAGTAATGCCCCTTGATTTCACCGGTTTCGGCCTG