Detailed information on CNT30444210


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30656303Aegilops tauschiiTriticum dicoccoides55.7179.2399.76820forward

Expression of CNT30444210

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MDFSRRRGRRTAPVAAIRTLHRTIQSVGATGGVYKGQGRSQRELMTRAY*

>peptide 2 (53 aa)
MMLSHANVSRAMACFEHSNFFKVTMPETRPGQLRLGARCRPKGPTTSFLTATT*

>peptide 3 (31 aa)
MTRARSVLVRVTTMILPQVHLRKPCYDFSFL*

>peptide 4 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 5 (39 aa)
MPAEGSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

>peptide 6 (43 aa)
MIRFNGLLATSGAANRPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 7 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

Sequence

>CNT30444210
TTGCAACACAAGGGACGGCTAGCAAGCTAGCCATGCCCCCGGGTTAGGCACAGTGTTCCTTGACGCCTTCGGCGCCGTGGGTTCTTTTACCCCGAGCCCC
CACCCGCTCCGAGGAGGGGAGGTGGTCGAGGCATTGGCCGAGCGACGGACAGTGCCGTCACCGACGGGTTGGATGACGCGTGCGCGGTCTGTTTTGGTCA
GGGTCACGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAATGGACTTCTCGCGACGTC
GGGGGCGGCGAACCGCCCCCGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAG
TCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATTACC
CGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA
ACTTCCGTCGCCTAAACGGCGATAGTCCCTCTAAGAAGCTAGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACG
GCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAG
CCGCAGGCTCCACGCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATA
AGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAAC
TTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATG
CCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGAT
GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGATGCCGGAAACACGACCCGGCCAATTAAGGCTAGGAGCGCGATGCCGGCCGAAGGGTCCAACT
ACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGG
GATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGCCCGGTATTGTTATTTATTGTCACTACCTCC