Detailed information on CNT30444121


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43767|NLT41_HORVU, E-value = 3e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30182409Aegilops tauschiiSecale cereale44.0648.8784.87152forward
CNT30688859Aegilops tauschiiTriticum urartu51.0128.4384.66176forward

Expression of CNT30444121

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MQGLKAELTWPQEIAASVAVRTIAATRVNNTS*

>peptide 2 (49 aa)
AGQTPDTTAAALLMHLHAACLSAVLRAAPARLLTPLQQAAGGLEPLPRA*

Sequence

>CNT30444121
GCCGGCCAGACTCCTGACACCACTGCAGCAGCACTCTTAATGCACTTGCACGCCGCTTGCTTGTCAGCGGTGCTCCGCGCTGCGCCGGCCAGACTCCTGA
CACCACTGCAGCAGGCCGCAGGTGGGCTGGAGCCGCTGCCGCGTGCATAGGAGATGCAGGGGCTCAAGGCAGAGCTCACCTGGCCACAGGAGATTGCAGC
GTCTGTGGCTGTGAGGACCATTGCTGCCACGAGGGTGAACAACACGAGTTGAGCAGCTGCAGCACGGGCCATCTTGATCAAGCTAGCAATAGTAGTAGTG
CTGAGCTCAGATGTAGATGATGAGATGGATGGACTTGCTAAGTGG