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Detailed information on CNT30444118


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222607Aegilops tauschiiHordeum vulgare21.5128.7588.394forward
CNT30390769Aegilops tauschiiTriticum turgidum42.7925.1793.05187forward

Expression of CNT30444118

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MAASVATRSIVATMATSTSGIAAPRAIPIEFAVVIVLNSAGDGERLDL

>peptide 2 (65 aa)
MDGAMDGSHDAGAQGGGHLTAGDGRVGGYEEHSGHHGDQHERNSCTASHPYRVCSSNRVELSWRW*

>peptide 3 (83 aa)
ISIIHIYTGSVRGTTYNKVSVLLKGSESKNNHSSSTIVAGHAELARRTHSFLPHMEIRSEHLFICIRDLSILSGDGWRYGRQP*

Sequence

>CNT30444118
TTATAAGCATAATCCATATATATACTGGAAGTGTACGCGGTACAACGTACAATAAAGTCTCGGTTCTCCTCAAAGGTAGTGAAAGTAAAAACAACCATAG
TAGTAGTACAATAGTTGCCGGCCATGCAGAGCTAGCTCGGCGTACGCACTCCTTTCTCCCTCACATGGAGATCAGATCAGAGCATTTATTCATATGTATT
AGAGACCTCAGCATACTCAGCGGTGATGGATGGCGCTATGGACGGCAGCCATGATGCAGGGGCTCAAGGCGGAGGTCACCTGACCGCAGGAGATGGCCGC
GTCGGTGGCTACGAGGAGCATAGTGGCCACCATGGCGACCAGCACGAGCGGAATAGCTGCACCGCGAGCCATCCCTATCGAGTTTGCAGTAGTAATCGTG
TTGAACTCAGCTGGAGATGGTGAGAGGCTAGATTTGC