Detailed information on CNT3044405


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 6e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315163Prunus dulcisCorylus avellana27.9433.3980.2202forward
CNT3019742Prunus dulcisCitrullus lanatus24.349.1787.5176forward
CNT30381249Prunus dulcisManihot esculenta16.7436.3490.91121forward
CNT30526628Prunus dulcisPhaseolus vulgaris19.2347.684.89139forward
CNT30487885Prunus dulcisOlea europaea20.0610.3383.45145forward
CNT3090059Prunus dulcisSolanum tuberosum23.6522.5381.87171forward
CNT30560987Prunus dulcisActinidia chinensis26.4237.684.29191forward
CNT3088433Prunus dulcisVigna radiata17.1522.6382.26124forward
CNT30716451Prunus dulcisMalus domestica golden21.7237.7485.35157reverse complement
CNT30620093Prunus dulcisCajanus cajan25.5919.2383.78185forward
CNT30645670Prunus dulcisCannabis sativa20.1928.3584.93146forward
CNT30113474Prunus dulcisFicus carica20.1912.2781.51146forward

Expression of CNT3044405

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MCWQRISTQNLSVRELIGPRTAAAKGVSIVSMENLSLSSYTKARGEIKESVFTAGDCDSTHWMIISKFIFSLS*

>peptide 2 (42 aa)
MGLTLKNLESQCCWLAFFFSSAHKQFEVLTRELLKDIIISFS*

Sequence

>CNT3044405
GCACTTCATATTAATGTGTCAAGTATTTTGATCTCAATTTTCCTTGCAGGACAATTAGATACATGGGGTTGACATTAAAGAATCTTGAAAGTCAGTGCTG
CTGGCTGGCTTTTTTTTTTTCCTCAGCTCACAAGCAGTTTGAAGTTCTAACTCGTGAATTACTGAAGGATATCATCATATCATTCAGTTGATTCTCAATC
CAAGACCTTCCTTGAATTCAGCCAGTTTTAGCGTCTCCTGAAGGATGTGTTGGCAGCGAATTTCGACCCAAAATTTATCTGTGAGAGAATTAATTGGCCC
TCGTACAGCTGCAGCCAAAGGAGTCAGCATTGTGTCTATGGAGAATTTGAGCCTGAGCTCATACACCAAAGCTAGAGGTGAGATCAAGGAAAGTGTTTTC
ACTGCAGGGGATTGTGATAGCACCCATTGGATGATCATATCCAAATTCATCTTCAGCTTGAGTTAACAAATCTTGAAATGACGGTTGGTTCAAGTATGAT
ACTGGAATCACAAACCGCTTCTTTTCACCCTCCCCAACATAGACTGCAAAGTAGCCTTTAGGAACATCCAAGGACTTTGAAGGTACTTTGTTTTTCTTAG
CATGTACAAAAATGCCAGGCAACCGGAAGCCCATCGTTTTGAAATTTCTAAATAACAAGACCAAAAAGGAAGATTTCAAATGAAGTGAGAAAGCTCTGAT
AAGATATTCTTAGGAATAGAAAC