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Detailed information on CNT3044393


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 5e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30144937Prunus dulcisMedicago truncatula17.9737.5982.05156forward
CNT30654465Prunus dulcisRosa chinensis24.6514.5491.12214forward
CNT30155035Prunus dulcisPrunus persica22.3596.0498.45194forward

Expression of CNT3044393

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MIISKFFFSLTQQIQEQRLIQIRYWNQKPLLLALPNIDCKIAFWDI*

>peptide 2 (36 aa)
MIISKFFHLCSVSSEMRMVRMDWMTDSCTLTHLSGK*

Sequence

>CNT3044393
AGGAGTTGATTTGCAAGAATGTGTTTCATCAAAATTTGATAACTTAGGATCAATCAAGCATTAAAAATGCCACTGAAATGGGCATGATATTTCCCTGGAG
AACATTGCTCCTGGAGAACAACAAAGACGTTTACATAGGTTTAAAAGACAGAATTTGACTGCCCTTGGGTGGGGGGATGATATTTGGACCAATGGTTCTA
GGGAATTCATGATATCATCACTTGTCTGCTTCATAAATTTCTATGTTTCTGCTCAGCCTAGAAGCAGCTTCAGGACTTGAGAAGGTTTGCTTTCACCACA
AGATGTGAGTTGATTCCATGGATGAGCAGTGGTAGCCTCTTCTTCATCCCAACTCAGTGAGTTCTGAAATGAGGATGCTTTGGATATGATCATATCCAAA
TTCTTTCATCTTTGCTCAGTGAGCTCTGAAATGAGGATGGTTCGGATGGATTGGATGACCGATTCGTGTACACTCACACACTTAAGCGGGAAGTGAGATC
AAGGAAGGTGTCTTCACTGCAGGGGATTGTGATACCACCCATGGGATGATCATATCCAAATTCTTCTTCAGCTTGACTCAGCAAATCCAGGAACAAAGGC
TCATTCAAATAAGATATTGGAATCAAAAACCGCTTCTTTTGGCTCTCCCCAACATAGACTGCAAAATAGCCTTTTGGGATATCTAAGGTCTTTGAATCAG
CCGTCTGACTTGAACTAGATAGAGATCGAATGAGACTTCTCTTGGCGTTAACAATTCCAGGCAACCGGAAACCCATGATTTAGTATTCTCAAGAGGACAA
AACAACAAGAAAAAGATTGGCAAGGACTTGGAAAAAACAGAGAGAGCTTTGGTGCGTGGGAAGGATAA