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Detailed information on CNT30443885


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180581Aegilops tauschiiSecale cereale60.1156.511001258reverse complement
CNT30226609Aegilops tauschiiHordeum vulgare55.4797.8999.661161forward

Expression of CNT30443885

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MCAEEASIIIRCLSNQKLLRLVGRTHANIILTLSRPIRVSESYFIQILSFPKLHKEKRVIGQQYCFHLF*

>peptide 2 (58 aa)
MTFMKNERCIKGFLSVSNKAGSILEFRGQLREVCLHVCRRSVYHYTLFIQSKTSSFSW*

>peptide 3 (31 aa)
MLLRIEIVPYPLQNGTLLQPHGMAPSFQTKL*

>peptide 4 (59 aa)
MIAKISISFVTLVFLIGIGKQIQPLGHCHSTSLSEYPTKSGPVGAGCAKPFDLPAGGPP*

Sequence

>CNT30443885
GTGCACTCTAATTTGGTAGAGAAATATATTACAACATTGTTTAGCTGTCTATACTCTGACTCTGCATTCAAATAGGGGTCAAAATGCTTGGTGTCCAACC
AGATATCCACAGAGAATAGTCAGTATTAGTTTACCATTTTCTAGTACATATTTCTAAACCAATTGCATCTCTGGTAACTCTGAAATTACTTGAATCAGTA
TTGCTATGAGATCCCCTCTCCAGTACTGCATGTTCCCTTGCCGCTCCAGTTGGTTTACTCCCAGAGACATGATTAGTACCACCAGAGCTTGAATCAATCA
TTCCATCCCCAACTCCTACATCAGAAACAACAGTGAGAAAAAACTCTTCCATTCTATCTATGGTAGATAAAGGAGCTTCAAAGCCGTAGCCATCCTCATG
GCCTTTTCACCCTACAGCCGTTGCACTTTTTTTATTAAATGAAATAGTTCGTTTTCTCGCTCTTAACTCGAAAGTACTAACTAAATAGGGGCACGGAGAA
ATAAAGAAGTGTGGGGGAGAAGCAGCCGAGCTCATTCCCTTCCATTCCTGCTCTATAGTAGGGGTTATGTCCCCCTTTCCTAGTGAGAGCAATACGCAAT
GCTGCTACGAATAGAGATAGTGCCCTATCCACTGCAAAACGGTACTCTGCTTCAACCACACGGTATGGCTCCCTCATTTCAAACCAAGCTGTAGACCGAG
TAGGAAACAGCTAAAGGTTCCGGTCCAAAGGTAAGAAGATCCGTTGGTTGGAAATCCGTATCAATTGTTACTGGTTCTCCCGTTCTTGGTACTGTGTCAT
GTGACTCTAAAGCCCCAACTAGGCTAGATCGAGATCTTGGTCCTTGCTAGGCTTACTCGCGTAAATAACCCCCATGTCTTAGGTGTTCTCGGGGGTAAGC
GAGTCAGTACAATCGGTTGCACAACCGTCCAGTCCATATCATAATTGTCATAATCAATCATATCAGTAGGTGGCATACTTGCCTGCTCAAGTCCATCTAC
TATGGATGTGGGCTTGGACCAAGCCATCCCCAAACACTGAACCGGATCTTGAAAACGGGACTGAACTGAATCCGACTTCTTGGTAGCCCAGTGGCTTTTG
GTCCCCATCGGAAAGTGCTGAATGGATTGCTCCTTGCCCAACGACAAAAAGAAAGAAATTTAGGAGAGGATTGATAGGTTTAAGCATTCAGGGCTGGTCG
CTCTTATGGATACCTGTGAGCTAGAGTCGGGAATCGAAAAGGAGACAACGGAAGCCGTACAGATCTAGTTGGGAATGCTGTTCATGCAGTGGAGAGCGTA
AATGACCGGCCCTTGAGGCGCGAGTAGACTTATCATATAGAAAGGAAAGAGATAAGCGGAGGGAGGATGGTTTGATGATAGCCAAGATCTCCATCTCATT
TGTCACTCTCGTATTCTTAATAGGAATCGGCAAGCAGATACAACCACTAGGCCATTGCCATTCGACTAGTCTATCAGAGTATCCTACGAAGTCAGGTCCA
GTAGGCGCAGGATGCGCTAAGCCATTCGATCTTCCTGCTGGTGGTCCACCATAGAGCTCCTATGTAGCCGTTTGTTTTCTCGCTTAACTAATTTGTATGA
GGCGATACAGCTGAGATCAGCCAACGGTTCGAGCACTTAGCACAATGTGCCACTTAACCGGACGAGCGCAAGACCGGGTCTACCTACCTTATGACATTTA
TGAAAAACGAACGTTGTATTAAGGGGTTTCTATCAGTTAGTAACAAAGCCGGCAGTATCCTTGAATTCAGGGGTCAGCTACGGGAGGTATGTCTCCATGT
GTGCCGAAGAAGCGTCTATCATTATACGCTGTTTATCCAATCAAAAACTTCTTCGTTTAGTTGGTAGAACCCACGCCAATATCATATTGACTCTCTCTCG
TCCAATAAGAGTTTCCGAGAGTTACTTTATTCAAATTCTCTCCTTTCCAAAGCTCCACAAGGAAAAAAGAGTAATAGGACAACAATATTGCTTTCATTTA
TTTTGAGTTCTTTCTTTGTTGAGATGGAAATCGACGTTCTTTTGAAAAGGGCTAGGTAGTTTGCGCGCAGGCAAAACTTCTTCATGAAAGGTC