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Detailed information on CNT30443845


BLAST search results

BLAST vs Swiss-Prot:
sp|P04165|CYB_MAIZE, E-value = 7e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390425Aegilops tauschiiTriticum turgidum82.2742.2298.25399forward
CNT30552006Aegilops tauschiiOryza glaberrima80.4122.1696.92390forward
CNT3081844Aegilops tauschiiBrassica juncea48.6633.7692.8236forward
CNT30229709Aegilops tauschiiAnanas comosus28.6629.297.84139forward
CNT30627910Aegilops tauschiiDaucus carota29.930.0289.66145forward
CNT30684485Aegilops tauschiiTriticum urartu82.2773.8998.25399forward
CNT30148125Aegilops tauschiiBrachypodium distachyon28.0448.7598.53136forward

Expression of CNT30443845

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSLIRVIFWNSSSNSSRMGVMAKNKKKKTEGICPIVTIGASTG*

Sequence

>CNT30443845
TTCTTGTAAATTCATTGTGTAAAATAACTCGTAAATTCATTGTGCCAGAATTGATCACTGATCAGGTGTGATCAGTCTCATCCGTCTAAGGATCCGGTGC
GATGAGTCTCATCCGTGTCATATTTTGGAATTCCTCTTCCAACTCGTCCCGGATGGGCGTTATGGCAAAGAACAAGAAGAAAAAGACAGAAGGAATTTGT
CCAATAGTAACAATTGGTGCCTCCACAGGTTGACATCCGATCCAACCTAGTAGTAAGCAATCCGCCAAAAGCAACCAAAATATTCCTTGGTGAATCGGTC
GAAAACTTGAACTACGCACATACATTTCTTAAAAAAAAGGTAAAGCCAAGAGAGATATAAAAACTGGTGCTATTGCGGCTACACCTCCCGCTTTGTCAGG
TATACTGCGAAGAATGGCATGGATCGGTAGGAAATACCATTCCGGCACAATATGAGGCGGGGTGGGCATCGGATTAGCAGGTATA