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Detailed information on CNT30443791


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 2e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675895Aegilops tauschiiSetaria viridis44.3333.1891.47211forward
CNT30523268Aegilops tauschiiSetaria italica44.3333.9891.47211forward
CNT30248458Aegilops tauschiiAvena sativa73.1161.789.94348forward
CNT30668240Aegilops tauschiiTriticum dicoccoides67.8654.2996.28323forward
CNT30343861Aegilops tauschiiEragrostis tef44.7537.3788.73213forward
CNT30366812Aegilops tauschiiSorghum bicolor43.2854.590.29206forward
CNT30497787Aegilops tauschiiDigitaria exilis43.0729.8488.29205forward

Expression of CNT30443791

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MPLAAVDDGGSATRDAMGAEGAAGQTEKGKRRLLNTVAIAAEFRASLGSTTP*

>peptide 2 (45 aa)
MPWAPKGRRGRRRRASGGCSIRWPLRRSSELAWEVLLRRRILGVGE

Sequence

>CNT30443791
TCCTGATACAGTTCGTACGTCGTGCATGGTACACGCGCACGGTGGAAACGGGTCGAACTAAACAAATCAGTGAATTCAAGCGGTGAGCTCCTCCTCCTTG
TGGGTCTCGATGACGAGGTCCGAGGTGGGGTACGCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCAGGAGTAGGGCAGGTCGATCCCTTCCTCCTCGGCGT
GGTCGAGGATGTAGACGTCGTCGGGGACCTCGAGGTCCACCTCGCCCTCCGGCGTGATCAGCTTCACCTTGTACGTCGCCTGCGCGCGGAGCCTCATGCC
CCTGGCGGCCGTCGACGACGGCGGGAGCGCGACGCGGGATGCCATGGGCGCCGAAGGGGCGGCGGGGCAGACGGAGAAGGGCAAGCGGAGGCTGCTCAAT
ACGGTGGCCATTGCGGCGGAGTTCCGAGCTAGCTTGGGAAGTACTACTCCGTAGGCGGATACTCGGTGTAGGAGAG