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Detailed information on CNT30443397


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307334Aegilops tauschiiTriticum aestivum10010097.37304forward
CNT30398345Aegilops tauschiiTriticum turgidum97.3797.6996.62296reverse complement
CNT30554032Aegilops tauschiiOryza glaberrima100.6663.8884.31306forward
CNT30669121Aegilops tauschiiTriticum dicoccoides99.0199.0196.68301forward
CNT30445279Aegilops tauschiiSaccharum spontaneum26.6413.8792.5981reverse complement
CNT3067608Aegilops tauschiiLeersia perrieri101.64100.3283.17309forward
CNT30368744Aegilops tauschiiSorghum bicolor96.0580.6688.01292forward
CNT30596339Aegilops tauschiiOryza meridionalis40.793192.74124reverse complement
CNT30369610Aegilops tauschiiOryza glumipatula101.3275.1284.42308reverse complement
CNT30105324Aegilops tauschiiOryza longistaminata97.0492.4885.42295reverse complement
CNT30100780Aegilops tauschiiOryza rufipogon100.9955.2285.99307reverse complement
CNT30576754Aegilops tauschiiOryza barthii100.6681.3884.31306reverse complement
CNT30116196Aegilops tauschiiOryza nivara101.3258.7885.71308forward

Expression of CNT30443397

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MWQAQREAGFTEQRQLPASNGGRITGRCTPGPLGPRSLLQRTVTF

Sequence

>CNT30443397
GCCGAGCTCAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGACGCTGTTGTAGCGCTGCGGGCCTGGTTTGGGTGTGCTATTGCTG
GCCCGCCCGTTCCAAGTTGCGTAGTGGACTGGTTGGGGCCTATGCGAAAGCTGGGCCTCACGATCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCA
CAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTGGCCCACTTGGGCCTCGCAGCCTACTCCAACGAACCGTCAC
TTTT