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Detailed information on CNT30443388


BLAST search results

BLAST vs Swiss-Prot:
sp|P04165|CYB_MAIZE, E-value = 1e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592530Aegilops tauschiiMusa acuminata42.9824.8292.31208forward

Expression of CNT30443388

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MVPPQVDIRSNLVVSNPPKATKIFLGESVENLNYAHTFL*

>peptide 2 (35 aa)
MSLIRVIFWNSSSNSSRMGVMAKNKKKKTEGICPI*

Sequence

>CNT30443388
TTCTTGTAAATTCATTGTGTAAAATAACTCGTAAATTCATTGTGCCAGAATTGATCACTGATCAGGTGTGATCAGTCTCATCCGTCTAAGGATCCGGTGC
GATGAGTCTCATCCGTGTCATATTTTGGAATTCCTCTTCCAACTCGTCCCGGATGGGCGTTATGGCAAAGAACAAGAAGAAAAAGACAGAAGGAATTTGT
CCAATATAACAAATGGTGCCTCCACAGGTTGACATCCGATCCAACCTAGTAGTAAGCAATCCGCCAAAAGCAACCAAAATATTCCTTGGTGAATCGGTCG
AAAACTTGAACTACGCACATACATTTCTTTAAAAAAAGGTAAAGCCAAGAGAGATATAAAAACTGGTGCTATTGCGGCTACACCTCCCGCTTTGTCAGGT
ATACTGCGAAGAATGGCATGGATCGGTAGGAAATACCATTCCGGCACAATATGAGGCGGGGTGGGCATCGGATTAGCAGGTATA