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Detailed information on CNT3044338


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 1e-114

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-122

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546134Prunus dulcisIpomoea triloba63.0681.9884.94664forward
CNT30525954Prunus dulcisPhaseolus vulgaris62.359.886.13656forward
CNT30630785Prunus dulcisVigna unguiculata62.376.9186.28656forward

Expression of CNT3044338

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 2 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKICI

>peptide 3 (40 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKCRVDSFWML*

>peptide 4 (42 aa)
RTNQKQRDEIITQEQIYLLNKKYQETKLDKCLPKRQRQYHET*

Sequence

>CNT3044338
CTCGGACAAACCAGAAGCAGAGAGATGAAATTATTACTCAAGAACAAATTTATTTATTAAACAAAAAGTACCAGGAAACCAAACTAGATAAATGCCTCCC
CAAGAGGCAGAGACAGTACCATGAAACTTGAAACTTAAAAATAAAAAACTTAAAAACATTGTTTTAAGGGAACCACAGAAACATTCATTAAAAGCAGGGT
GACACCAGAGACTTCCACTTCCTAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCG
TCCTCCAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGAGC
TCTCGACCTCCAAAGTGATAGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCATACCACCACGGAGACGAAGCACCAAATGTAGAGTGGACTCCTTCTG
GATGTTGTAGTCAGCAAGGGGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATCTT
AGCCTTAACGTTGTCAATGGTATCGGAGCTTTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGG
AGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAGTCTGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTG
GGGGGATACCTTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTGCCGGGTACGGCCGTCCT
CTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCAGATGACTC
CACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTTTTCACGAAGATTTGCATCT