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Detailed information on CNT30443372


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307634Aegilops tauschiiTriticum aestivum93.1348.8399.68312forward
CNT30397867Aegilops tauschiiTriticum turgidum93.1368.7293.59312forward
CNT30248711Aegilops tauschiiAvena sativa44.4826.3785.91149forward

Expression of CNT30443372

Peptides detected in this lncRNA

>peptide 1 (70 aa)
WKKKRMRRLMEVVMACCSLQCVSFAAADCRRTCLAFWRHSSHLSTSLIPETCTLVGLLSMLLVVSGVLLS*

>peptide 2 (35 aa)
MTNLSNRMNSVLELYLLLILGHQVLHAFACINIIV*

Sequence

>CNT30443372
AGTGGAAGAAGAAGCGCATGAGGAGGCTGATGGAGGTGGTGATGGCGTGCTGTAGCTTGCAATGTGTGTCTTTCGCTGCGGCTGACTGCAGGCGTACTTG
CTTGGCATTTTGGCGCCATTCTTCTCATCTGTCAACTTCGCTTATTCCAGAAACCTGCACTTTAGTAGGCCTGTTATCGATGCTTTTAGTTGTATCAGGA
GTTTTGCTATCATGACCAATCTATCGAACCGTATGAACTCTGTTTTGGAGCTTTATTTGCTGCTAATACTCGGCCATCAAGTACTTCATGCTTTTGCTTG
TATCAACATTATTGTCTGAATGCTCTTATCTGCTG