Detailed information on CNT30443351


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176909Aegilops tauschiiSecale cereale4024.7781.25192forward
CNT30283261Aegilops tauschiiTriticum aestivum100.8336.5886.16484forward
CNT30395667Aegilops tauschiiTriticum turgidum100.6339.9586.54483forward
CNT30719766Aegilops tauschiiTriticum spelta100.8339.6486.16484forward

Expression of CNT30443351

Peptides detected in this lncRNA

>peptide 1 (45 aa)
ACSRWPRFRGRLDDHSGRCELDASSTGKGARTYLRTMKWQERTMR*

>peptide 2 (57 aa)
MLIHGEDNFLSILIYIFSFDPGATINNGTDWYESMDEATKRFWRQSVVTRERNMWFC*

>peptide 3 (37 aa)
ARAAGGQDSAGGWTITVEDANSMQAQQAKAQEHTCGR*

>peptide 4 (39 aa)
MEQIGMRVWMKPRRDFGGNLLLRGRETCGFADFLEANCN*

>peptide 5 (76 aa)
RVQPVAKIPREVGRSQWKMRTRCKLNRQRRKNIPADDEVARADDEVAGAPSMLKNTVDVDPRRGQFPINLDLYIFL*

Sequence

>CNT30443351
GCGCGTGCAGCCGGTGGCCAAGATTCCGCGGGAGGTTGGACGATCACAGTGGAAGATGCGAACTCGATGCAAGCTCAACAGGCAAAGGCGCAAGAACATA
CCTGCGGACGATGAAGTGGCAAGAGCGGACGATGAGGTAGCAGGAGCTCCGTCCATGCTAAAGAACACAGTAGATGTTGATCCACGGAGAGGACAATTTC
CTATCAATCTTGATCTATATATTTTCCTTTGATCCAGGGGCAACAATTAACAATGGAACAGATTGGTATGAGAGTATGGATGAAGCCACGAAGAGATTTT
GGCGGCAATCTGTTGTTACGCGGGAGAGAAACATGTGGTTTTGCTGATTTTCTGGAAGCTAACTGCAATTAGAGAGATACGGGTTGTTTAAGTGGTGGGG
TCATACCAGGACAGGTGTCGGCCACCTGTTGGCCCTGCACAATAGTGCGTGCTGGGAACCCAGCAGGAGAGCCCGACCCC