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Detailed information on CNT3044334


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 8e-115

BLAST vs NONCODE:
NONTPRT002153, E-value = 2e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30586586Prunus dulcisMusa acuminata75.0848.3185.44687forward
CNT30153569Prunus dulcisPrunus persica98.8100.2298.23904forward

Expression of CNT3044334

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKCRVDSFWML*

>peptide 2 (42 aa)
RTNQKQRDEIITQEQIYLLNKKYQETKLDKCLPKRQRQYHET*

>peptide 3 (34 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTKWRG*

>peptide 4 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKICI

Sequence

>CNT3044334
CTCGGACAAACCAGAAGCAGAGAGATGAAATTATTACTCAAGAACAAATTTATTTATTAAACAAAAAGTACCAGGAAACCAAACTAGATAAATGCCTCCC
CAAGAGGCAGAGACAGTACCATGAAACTTGAAACTTAAAAATAAAAAACTTAAAAACATTGTTTTAAGGGAACCACAGAAACATTCATTAAAAGCAGGGT
GACACCAGAGACTTCCACTTCCTAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCG
TCCTCCAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGAGC
TCTCGACCTCCAAAGTGATAGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCATACCACCACGGAGACGAAGCACCAAATGTAGAGTGGACTCCTTCTG
GATGTTGTAGTCAGCAAGGGGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATCTT
AGCCTTAACGTTGTCAATGGTATCGGAGCTTTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGG
AGCACCAAGTGGAGGGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCT
GGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTTTTCA
CGAAGATTTGCATCT