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Detailed information on CNT30443030


BLAST search results

BLAST vs Swiss-Prot:
sp|O65581|ALFC5_ARATH, E-value = 3e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30398448Aegilops tauschiiTriticum turgidum55.1191.5194.5291forward
CNT30242401Aegilops tauschiiAvena sativa20.8322.8297.27110forward
CNT30370572Aegilops tauschiiOryza glumipatula37.6981.5692.96199forward

Expression of CNT30443030

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MVLCCNARPKEKVSVQGLSTTSLFMASRFCVACSSLCPPDRNTTPGTAGGTVRRSAATVYSAITS

>peptide 2 (50 aa)
MARERRCLSTCTPRRVSSRTRRRPRRRRRRRTCRAWPARRRRSPSCRPTS*

Sequence

>CNT30443030
CCACTTATATATCATCAGTAGTTCTGGTTAAATAGGAGAAGGGGAAGGGAGAGAGAATTTAAGTACACGGCAGAAAAGGAAGAGCATATATATCTGCATG
CACGCACGAATCTTGGCGCAATCCATGTGCCGCGCCGTGCGCACGCACACACGGGTTGCACCGAGGTCCTAGGTCCGGGAATGGCGCGGGAGCGACGGTG
CCTTAGTACTTGTACCCCGCGACGTGTAAGCTCTCGGACGCGGCGGCGTCCCCGCCGGCGGCGGCGCCGCCGTACTTGCCGAGCGTGGCCTGCGCGTCGG
CGACGTTCTCCTTCTTGCCGGCCCACTTCTTGATGGTGCTCTGCTGCAACGCCCGGCCGAAGGAGAAGGTGAGCGTCCAGGGCTTGAGCACCACCAGCTT
GTTCATGGCGTCCAGGTTCTGCGTCGCCTGCTCCTCGCTCTGCCCGCCCGACAGGAACACCACCCCGGGCACCGCCGGCGGCACCGTGCGCCGCAGCGCC
GCCACCGTGTACTCCGCTATCACCTCCG