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Detailed information on CNT30442843


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 8e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193051Aegilops tauschiiSecale cereale54.6651.7391.9358forward
CNT30307945Aegilops tauschiiTriticum aestivum51.4553.1599.7337forward
CNT30398821Aegilops tauschiiTriticum turgidum103.3675.3192.32677forward
CNT30687640Aegilops tauschiiTriticum urartu89.4762.0193586forward

Expression of CNT30442843

Peptides detected in this lncRNA

>peptide 1 (63 aa)
QRDSSAIRIHFSTLNYVHASITTVVYLTVQKGNSETLLLDQITHRAIHSSTNKSEYLAMSMHA*

Sequence

>CNT30442843
CAGAGAGACTCCTCAGCCATCAGGATTCATTTCAGTACGTTGAATTACGTACACGCTAGTATTACGACAGTAGTATATCTTACGGTACAAAAAGGTAATT
CGGAGACATTATTACTTGACCAAATCACGCATCGAGCAATTCATTCGAGCACAAACAAATCGGAGTATCTGGCCATGTCAATGCATGCATGATAAGGAGA
TAGTATGATATCAGCTCGATCTCGTTGCAAAGAGAGATAGGTATAGCAGCTTATGCGGTGAGCTCCTCCTCCTTGTGGGTCTCGATGACGATGTCGGACT
TGGGGTAGGCGTGGCAGGTGAGCACCCACCCGGCCTCCATCTGGTCGTCGTCGAGGAAGCTCTGGTCGGACTGGTCGATCTCGCCGGACACCAACTTGCC
GGCGCAGGAGGAGCAGGAGCCGGCGCGGCAGGAGTAGGGCAGGTCGATCCCCTCCTCCTCGGCCTGGTCGAGGATGTAGACGTCGTCGGGGACCTCCAGC
TCCACCTCGCCCTCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTGCGCGCGGAGCCTGGCTCAGTGCGGCGGCCATTGGTGGCTAGCTAGCTGGAGCT
TGGACGCTCTTTCTCTGTGTGGCTGAGAAGGTGGAGAGGATAGGCGGGCGAGCTA