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Detailed information on CNT30442726


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 2e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30141549Aegilops tauschiiLolium perenne68.2976.8691.33392forward

Expression of CNT30442726

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MMVTRLAWMAHRLVSSNSPTRYASAASWRASTAWDWKRRSVLKSCAISRTRRWNGSLRMRSSVLFWYFLISRSATVPGL*

>peptide 2 (77 aa)
QARAFVTTVTNQHGFLQRSTRCISRQGRLINYYKCWRTLECAPECRMRRRRRQGLDWPRSLRRAPRGCGGRAGCPWA*

>peptide 3 (61 aa)
AGKSLCNYGNQPTWFSTTIHKMHISTREANQLLQMLANVGMRPRMPNAATTAAGAGLASLA*

Sequence

>CNT30442726
GCAGGCAAGAGCCTTTGTAACTACGGTAACCAACCAACATGGTTTTCTACAACGATCCACAAGATGCATATCTCGACAAGGGAGGCTAATCAACTACTAC
AAATGCTGGCGAACGTTGGAATGCGCCCCCGAATGCCGAATGCGGCGACGACGGCGGCAGGGGCTGGATTGGCCTCGCTCGCTTAGGCGCGCTCCCCGCG
GATGCGGCGGGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCACAGGTTGGCATGATGGTGACGCGCTTGGCGTGGATGG
CGCACAGGTTGGTGTCCTCGAACAGCCCGACGAGGTACGCCTCGGCCGCCTCCTGGAGGGCCAGCACGGCGTGGGACTGGAAGCGGAGGTCCGTCTTGAA
GTCCTGCGCGATCTCGCGGACCAGGCGCTGGAACGGCAGCTTGCGGATGAGGAGCTCGGTGCTCTTCTGGTACTTCCTGATCTCGCGGAGCGCGACGGTC
CCGGGCCTGTAGCGGTGGGGCTTCTTCACTCCGCCGGTGGTCGGCGCCGACTTCCTCGCCGCCTGAAATCACAC