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Detailed information on CNT30442558


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 1e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523690Aegilops tauschiiSetaria italica49.6235.0887.36261forward
CNT30400520Aegilops tauschiiTriticum turgidum37.6426.8798.99198forward
CNT30591745Aegilops tauschiiMusa acuminata19.7723.1686.54104forward
CNT30668396Aegilops tauschiiTriticum dicoccoides88.7890.3396.57467forward
CNT30596694Aegilops tauschiiOryza meridionalis47.1529.4985.89248forward

Expression of CNT30442558

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MPLAAVDDGGSATRDAMGAEGAAGQTEKGKRRLLNTVAIAAEFRASLGSTTP*

>peptide 2 (65 aa)
MTRSEVGYAAQVSTHPASIWSSSRKLWSDCRSRRGRSRAGRSLPPRRGRGCRRRRGPRGPPRPPA*

>peptide 3 (45 aa)
MPWAPKGRRGRRRRASGGCSIRWPLRRSSELAWEVLLRRRILGVGE

Sequence

>CNT30442558
TCCTGATACAGTTCGTACGTCGTGCATGGTACACGCGCACGGTGGAAACGGGTCGAACTAAACAAATCAGTGAATTCAAGCGGTGAGCTCCTCCTCCTTG
TGGGTCTCGATGACGAGGTCCGAGGTGGGGTACGCGGCGCAGGTGAGCACCCACCCCGCCTCGATCTGGTCGTCGTCGAGGAAGCTCTGGTCGGACTGCA
GGAGCCGGCGCGGCAGGAGTAGGGCAGGTCGATCCCTTCCTCCTCGGCGTGGTCGAGGATGTAGACGTCGTCGGGGACCTCGAGGTCCACCTCGCCCTCC
GGCGTGATCAGCTTCACCTTGTACGTCGCCTGCGCGCGGAGCCTCATGCCCCTGGCGGCCGTCGACGACGGCGGGAGCGCGACGCGGGATGCCATGGGCG
CCGAAGGGGCGGCGGGGCAGACGGAGAAGGGCAAGCGGAGGCTGCTCAATACGGTGGCCATTGCGGCGGAGTTCCGAGCTAGCTTGGGAAGTACTACTCC
GTAGGCGGATACTCGGTGTAGGAGAG