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Detailed information on CNT30442188


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197849Aegilops tauschiiPisum sativum73.0533.6692.62244forward
CNT30679552Aegilops tauschiiTriticum urartu10024.2698.5334forward
CNT30483529Aegilops tauschiiChara braunii14.6724.2691.8449forward
CNT3035080Aegilops tauschiiCucumis melo78.144.9993.87261forward

Expression of CNT30442188

Peptides detected in this lncRNA

>peptide 1 (35 aa)
RVLGNIPFLESQWILEPVKRLLLKRKLLVFPSPRV*

Sequence

>CNT30442188
AGGGTGCTTGGTAATATTCCATTCCTTGAAAGCCAGTGGATACTAGAGCCAGTGAAACGGTTGCTACTAAAGCGTAAACTGCTCGTTTTTCCTTCCCCGC
GAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAGGGAGAATAGGGGTATTAAGAAGAGGGATTTCCCAAGGATCTAAAACCCCAATCCCT
TTTGGGGGCCAAATACCTCCGATCTCTACCGTAGGTGCCAAAGAAGAATGCGAAGAAGCCCAAAAAAAAGCAAAAAAGGAACATAACCTCCGAGACTATG
AAGAGAATAGAACCATATCGAGGTCCTAATTGTA