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Detailed information on CNT30442146


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30252948Aegilops tauschiiAvena sativa65.8355.7995.5289forward
CNT30667347Aegilops tauschiiTriticum dicoccoides101.1497.893.24444forward

Expression of CNT30442146

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MSPEMRFTPPLLASLRIAGLVMPWMLSRSTFRWRLAPPLPSPLPPLPRPDIAGDEMEAVYHERFGVAV

>peptide 2 (41 aa)
TETSIASALDSRRGGVRLQSKAGNSSVSQRQRADGAQPPKP*

>peptide 3 (33 aa)
YRNKHSQRTGFTTGGSKTTEQSRKQQCQPAAAR*

Sequence

>CNT30442146
TACAGAAACAAGCATAGCCAGCGCACTGGATTCACGACGGGGGGGAGTAAGACTACAGAGCAAAGCAGGAAACAGCAGTGTCAGCCAGCGGCAGCGCGCT
GATGGCGCTCAGCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGGGCGTACACGACGTCCATGGCGGTGACGGCGTCGCGGATGACGTTCTCGA
GGAAGATCTTGAGGACGCCGCGGGTCTCCTCGTAGATGAGCCCCGAGATGCGCTTCACACCGCCCCTCCTGGCCAGCCTCCGGATCGCCGGCTTGGTGAT
GCCCTGGATGTTGTCCCGGAGCACCTTCCGGTGGCGCTTGGCGCCGCCCTTGCCGAGCCCCTTGCCGCCCTTGCCACGCCCAGACATCGCCGGAGATGAG
ATGGAAGCTGTCTACCACGAGAGATTTGGAGTCGCTGTG