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Detailed information on CNT30441793


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696313Aegilops tauschiiOryza sativa43.9814.5597.01201reverse complement
CNT30617621Aegilops tauschiiSesamum indicum43.337590.91198reverse complement
CNT30198622Aegilops tauschiiPisum sativum49.2327.6887.11225reverse complement
CNT30502639Aegilops tauschiiNicotiana attenuata40.2618.2282.61184forward
CNT3093954Aegilops tauschiiSolanum tuberosum53.1714.8488.89243reverse complement
CNT30396203Aegilops tauschiiTriticum turgidum63.2498.9798.62289reverse complement
CNT30509771Aegilops tauschiiSolanum lycopersicum28.4512.491.54130forward
CNT30555485Aegilops tauschiiOryza glaberrima43.1115.7796.95197reverse complement
CNT30314546Aegilops tauschiiCamelina sativa59.9630.5591.24274reverse complement
CNT3077259Aegilops tauschiiBrassica juncea37.6419.391.86172reverse complement
CNT3018193Aegilops tauschiiZea mays55.5891.796.46254reverse complement
CNT30339731Aegilops tauschiiEragrostis tef21.8829.8598100forward
CNT30360899Aegilops tauschiiLactuca sativa61.2749.6590280forward
CNT30103751Aegilops tauschiiOryza rufipogon19.9140.4496.791forward

Expression of CNT30441793

Peptides detected in this lncRNA

>peptide 1 (35 aa)
LKHEQNRKRPLFQREEDGLFTFNLMVRGKLKAKQW*

Sequence

>CNT30441793
GTTTGAAGCACGAACAGAACCGGAAGCGCCCCTTGTTTCAAAGAGAGGAGGACGGGTTATTCACATTTAATTTGATGGTCAGAGGCAAATTGAAAGCTAA
GCAGTGGTAATTAAGACCCCCGGGGGAAAATAGGGATGTCTCCTACGTTACCCATAATATGTGGAAGACGGGTTATTCACATTTAATTTGATGGTCAGAG
GCAAATTGAAAGCTAAGCAGTGGTAATTAAGACCCCCGGGGGAAAATAGGGATGTCTCCTACGTTACCCATAATATGTGGAAGTATCGACGTAATTTCAT
AGAGTCATTCGATCTGAATGCTACATGAAGAACATAAGCCAGATGACAGAACACAAAGACCTAGGATGTAGAAGATCATAACATGAGCGATTCGGCAGAT
TTGGATTCCTTTCCTATATATCCACTCATGTGGTACTTCATCATATGATTCATATAA