Detailed information on CNT30441614


BLAST search results

BLAST vs Swiss-Prot:
sp|P34887|CYPH_ALLCE, E-value = 9e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30569495Aegilops tauschiiActinidia chinensis18.4226.8686.84152forward
CNT30667711Aegilops tauschiiTriticum dicoccoides38.4246.7694.64317forward
CNT30128639Aegilops tauschiiCorymbia citriodora16.3627.3886.67135forward
CNT30686175Aegilops tauschiiTriticum urartu38.0641.0598.09314forward
CNT30722480Aegilops tauschiiTriticum spelta28.7341.894.51237forward
CNT30364838Aegilops tauschiiSorghum bicolor30.9150.986.67255forward
CNT30575409Aegilops tauschiiOryza barthii19.3925.7690.62160forward

Expression of CNT30441614

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MTTCLEQVPLREPTFSMFLTTSMPSTTSPKTTCLPSSQLQGTVQMKNWEPLVLGPALAMERIPGLVCLWTRRRCRCPG*

>peptide 2 (29 aa)
MRPAGAPPTVMSKNTLGLAISLAGIGDEG*

>peptide 3 (30 aa)
MDSPPVPLPRVKSPPWHMKSGITRWKALPL*

Sequence

>CNT30441614
GCACAAATAATGGATAATTCATAGCGGAGTTCATCTCATTCAAACGGTAAGATAGCAGCAGACACAGGAAGATAACCAAGGCGGCCGGACAGAGATCCGG
CAGCCCAAAGAGTCCACCTAAAACCCTCCTAAACCAACCACGGAGATCTCATCGGACGGACCAGGGGAAGACACGACACGACACACGACTCTCTTATTGA
TCGACGACACGACACGGGACACACGGGGCGGCGACGACGACGGCGAAAGGCGACCCGCGCGCGGGCGGATCTAGAGCTGGCCGCAGTCGGCGATGACCAC
CTGCTTGGAGCAGGTGCCGCTGCGGGAGCCCACCTTCTCGATGTTCTTGACGACGTCCATGCCCTCGACGACCTCGCCGAAGACCACGTGCTTGCCGTCG
AGCCAATTGCAGGGGACGGTGCAGATGAAGAACTGGGAGCCGTTGGTGTTGGGCCCCGCGTTGGCCATGGAGAGGATCCCGGGCTTGGTGTGCTTATGGA
CTCGCCGCCGGTGCCGTTGCCCCGGGTGAAGTCGCCGCCCTGGCACATGAAGTCGGGGATCACGCGGTGGAAGGCGCTGCCCTTGTAGTGCAGCGGCTTG
CCGCTCTTGCCGACGCCCTTCTCGCCGGTGCACAGCGCGCGGAAGTTCTCCACCGTCCGCGGCACCGCGTCCTTGTACAGCTCCATCACGATGCGCCCGG
CTGGCGCGCCGCCGACGGTCATGTCGAAGAACACCCTCGGGTTGGCCATCTCGCTCGCCGGGATCGGGGATGAGGGCTAGGGTTTTGAGATGGGGATTTC
TGTGGGGATTGGGATTACCTTTCGC