Detailed information on CNT30441445


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-100

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192776Aegilops tauschiiSecale cereale63.4449.3291.95472forward
CNT30309070Aegilops tauschiiTriticum aestivum10045.26100744forward
CNT30397549Aegilops tauschiiTriticum turgidum57.9364.7194.2431forward
CNT30242628Aegilops tauschiiAvena sativa62.6359.2192.92466forward
CNT30667543Aegilops tauschiiTriticum dicoccoides66.2630.6492.9493forward
CNT30141933Aegilops tauschiiLolium perenne64.9266.9993.79483forward
CNT30689794Aegilops tauschiiTriticum urartu63.4465.5693.01472forward
CNT30722589Aegilops tauschiiTriticum spelta99.19100100738forward
CNT30576670Aegilops tauschiiOryza barthii62.955.9190.6468forward
CNT30583294Aegilops tauschiiEchinochloa crusgalli62.924.5991.03468forward

Expression of CNT30441445

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSDDSTSRVMVLPVRVFTNICICKYKVNPE*

>peptide 2 (34 aa)
EELTQITHDIKSSLINHSSPSKATASNRHNRTDQ*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

Sequence

>CNT30441445
GAAGAACTGACACAAATTACGCACGATATTAAGAGCTCCCTTATTAATCATAGTTCACCATCCAAAGCCACGGCAAGTAATCGACACAACCGAACAGATC
AGTAATCGACACAACCGAACAGATCAGTGATGGAAACAACGACACGACCAGACAAGCGCACCTATTGGAGGACACCGACGACACAAGACCTGTGAACCCA
ACAGAAGCCACACCGTGACCAGGCACTTACTGGCCACCACGCAGGCGAAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGAGTGC
GGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTC
CGAGGACTCCACCTCCAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATACCACCACGAAGGCGGAGCACCAGGTGGAGAGTGGACTCC
TTCTGGATGTTGTAGTCAGCAAGGGTACGACCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTAAA
TCTTCGCCTTGACGTTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCATCTGTAAATACAA
AGTAAACCCAGAGTAAGAAGCAGTTGAAAGGGAACATGCAGGAC