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Detailed information on CNT30441386


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 9e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673835Aegilops tauschiiSetaria viridis23.7532.5796.49114forward
CNT30547549Aegilops tauschiiIpomoea triloba51.8832.1780.32249forward
CNT30698248Aegilops tauschiiQuercus lobata46.4630.5583.41223forward
CNT30274756Aegilops tauschiiChenopodium quinoa43.9619.5781.99211forward
CNT30380641Aegilops tauschiiManihot esculenta53.9637.4879.15259forward
CNT30709007Aegilops tauschiiGlycine max36.0472.6985.55173forward
CNT3048083Aegilops tauschiiPrunus dulcis54.1737.0481.54260forward
CNT30177168Aegilops tauschiiSecale cereale54.5835.2693.89262forward
CNT30283601Aegilops tauschiiTriticum aestivum53.5439.8493.77257forward
CNT3084857Aegilops tauschiiVigna radiata47.9218.7381.3230forward
CNT30240569Aegilops tauschiiAvena sativa75.2155.8893.35361forward
CNT30657055Aegilops tauschiiTriticum dicoccoides53.5449.1493.39257forward
CNT30259840Aegilops tauschiiBrassica rapa42.570.5985.78204forward
CNT30141394Aegilops tauschiiLolium perenne54.5840.8796.95262forward
CNT30722562Aegilops tauschiiTriticum spelta45.4240.22100218forward
CNT30368649Aegilops tauschiiSorghum bicolor51.2558.5796.75246forward
CNT3099660Aegilops tauschiiOryza rufipogon54.7958.0688.59263forward
CNT30585391Aegilops tauschiiEchinochloa crusgalli54.5840.2593.13262forward
CNT3051266Aegilops tauschiiCucumis sativus31.0419.8781.21149forward
CNT3018856Aegilops tauschiiCyanidioschyzon merolae41.6786.9682.5200forward

Expression of CNT30441386

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MSSSVLFWYLRISRSATVPGRKRCGFFTPPVAGADLRAALVASCFRGALPPVDLRAVCFVRATAGGAGGAGMGDRRGLLGCFEVK

>peptide 2 (30 aa)
GTDPKHLAMASEAPRRAPRGCGGQAGCPWA*

>peptide 3 (38 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKRPTSSGSGGRS*

Sequence

>CNT30441386
CGGGAACAGATCCTAAACACCTAGCAATGGCAAGCGAGGCGCCTAGGCGCGCTCCCCGCGGATGCGGCGGGCAAGCTGGATGTCCTTGGGCATGATGGTG
ACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGGCCGACGAGCTCTGGAAGCGGAGGTCGGTCTTGAAGTCCTGCGCGATCTCCCGGAC
CAGGCGCTGGAAGGGGAGCTTGCGGATGAGCAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCGCGCAGCGCGACGGTGCCCGGGCGGAAGCGGTGCGGC
TTCTTCACGCCGCCGGTCGCCGGGGCCGACTTGCGCGCCGCCTTGGTCGCCAGCTGCTTCCGCGGGGCCTTGCCGCCGGTGGACTTGCGCGCCGTCTGCT
TCGTGCGGGCCACCGCGGGAGGAGCGGGGGGCGCCGGGATGGGAGATCGGAGAGGTTTGCTCGGGTGTTTTGAAGTGAAG