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Detailed information on CNT30441194


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 1e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186481Aegilops tauschiiSecale cereale49.8949.9595.58475forward
CNT30555034Aegilops tauschiiOryza glaberrima60.7154.8490.31578forward

Expression of CNT30441194

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLASFASGELRLTVGL*

>peptide 2 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 3 (43 aa)
MAWTKKPNMENMARRPFLISFTLSSAKASGSSARPRGSKLPPG*

>peptide 4 (29 aa)
MAQRQWITSSSRFLAKVSGSADRPAVSQP*

Sequence

>CNT30441194
AGAAGAACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAACTCCTCATCTCGAATCGCC
CTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCATGAA
GTTGTCGGCCTAGAGGTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTC
GGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACC
TTGAGCTCCGCGAAGGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGG
CCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAACGGCAGTGGAT
CACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCCGACAGGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGCGGGCCG
AGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCCCCGAAGG
GCGCCGCCCTGGAGGCCTTCACAGGTGTGCCCGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTACTCGCTAGCTTTGC
TTCGGGCGAGCTGAGGCTGACAGTAGGACTGTAGGAGGCGCTGGTGGTCGTT