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Detailed information on CNT30441148


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 5e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300174Aegilops tauschiiTriticum aestivum94.898.7394.98857forward
CNT30395260Aegilops tauschiiTriticum turgidum94.9199.0894.99858forward
CNT30251243Aegilops tauschiiAvena sativa58.5254.5489.22529forward
CNT30665321Aegilops tauschiiTriticum dicoccoides89.2794.9495.91807forward
CNT30684601Aegilops tauschiiTriticum urartu65.8261.9193.95595forward
CNT30345510Aegilops tauschiiEragrostis tef51.8855.7788.91469forward

Expression of CNT30441148

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (52 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLASFASGELRLTVGL*

>peptide 3 (67 aa)
MHQAGVAEVVEAALAEDLGAGLEPHGLAELDAVAGEQLREDAAERAEHGPTAVDHLQLPSPGNSPVR*

Sequence

>CNT30441148
AACCAAGGAGTTAAGCAGAAGAACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAACTC
CTCATCTCGAATCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGC
ATCCATCAGCCATGAAGTTGTCGGCCTAGAGGTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGGGGTCGAAGCTGCCG
CCGGGGTAGAGCGGGTCCACGATCTCGCCCAGCGGGCCGCCGGCCACGCGGTAGCCCTCCACGGCGCCCATCAGCACCACCTGGCAGGCCCAGATGGCAA
GGATGCTCTGCGCATGCACCAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCACACGGCCTCGCCGAA
CTTGACGCCGTTGCGGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAACGGCAGTGGATCACCTCCAGCTCCCGTCGCCGGGGA
ACTCGCCGGTGAGGTAGCTCGGCGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGG
CTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCCCCGAAGGGCGCCGCCCTGGAGGCCTTCACAGGTGTGCCCGCCATCGCCGGGGAGGAGAGCGCC
ATGGTCGCGGCCGCCATCGCGCGCTGCGTACTCGCTAGCTTTGCTTCGGGCGAGCTGAGGCTGACAGTAGGACTGTAGGAGGCGCTGGTGGTCGTTGGAG
CTGT