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Detailed information on CNT30441097


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 1e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695986Aegilops tauschiiOryza sativa46.8929.8194.98279forward
CNT30672311Aegilops tauschiiSetaria viridis57.9850.5191.59345forward
CNT30522718Aegilops tauschiiSetaria italica35.4628.6395.26211forward
CNT30224983Aegilops tauschiiHordeum vulgare43.742.6298.46260forward
CNT30589400Aegilops tauschiiMusa acuminata47.2341.0891.1281forward
CNT30250195Aegilops tauschiiAvena sativa78.3272.5990.13466forward
CNT30129910Aegilops tauschiiCorymbia citriodora47.3944.7691.49282forward
CNT30345523Aegilops tauschiiEragrostis tef47.2331.1994.31281forward
CNT30108138Aegilops tauschiiOryza longistaminata34.4525.3197.56205forward
CNT30117588Aegilops tauschiiOryza nivara46.8923.1294.98279forward

Expression of CNT30441097

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLASFASGELRLTVGL*

>peptide 2 (43 aa)
MAWTKKPNMENMARRPFLISFTLSSAKASGSSARPRGSKLPPG*

Sequence

>CNT30441097
ATGAAGTTGTCGGCCTAGAGGTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGG
TGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCT
TCACCTTGAGCTCCGCGAAGGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATCTCGCCCAGCGGGCC
GCCGGCCACGCGGTAGCTCGGCGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGC
TTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCCCCGAAGGGCGCCGCCCTGGAGGCCTTCACAGGTGTGCCCGCCATCGCCGGGGAGGAGAGCGCCA
TGGTCGCGGCCGCCATCGCGCGCTGCGTACTCGCTAGCTTTGCTTCGGGCGAGCTGAGGCTGACAGTAGGACTGTAGGAGGCGCTGGTGGTCGTT