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Detailed information on CNT30441049


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 1e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693909Aegilops tauschiiOryza sativa41.0110.9584.52155forward
CNT30640134Aegilops tauschiiNymphaea colorata43.3923.8485.37164forward
CNT30547471Aegilops tauschiiIpomoea triloba73.0251.0281.88276forward
CNT30512774Aegilops tauschiiJuglans regia92.8628.1286.04351forward
CNT30372970Aegilops tauschiiArabidopsis thaliana57.9444.4285.84219forward
CNT3071371Aegilops tauschiiQuercus suber29.8939.3789.38113forward
CNT30405832Aegilops tauschiiBeta vulgaris78.3136.9182.77296forward
CNT30636551Aegilops tauschiiCapsicum annuum79.145.384.95299forward
CNT30192963Aegilops tauschiiSecale cereale52.6537.2796.48199forward
CNT30224842Aegilops tauschiiHordeum vulgare98.6885.1697.86373forward
CNT30510528Aegilops tauschiiSolanum lycopersicum91.0126.7184.59344forward
CNT30143750Aegilops tauschiiMedicago truncatula97.8848.382.97370forward
CNT30665536Aegilops tauschiiTriticum dicoccoides66.1437.9497.6250forward
CNT30309889Aegilops tauschiiCamelina sativa90.7434.9383.97343forward
CNT30263415Aegilops tauschiiBrassica rapa90.4845.8485.67342forward
CNT30612508Aegilops tauschiiArabis alpina93.3913.9184.14353forward
CNT30448454Aegilops tauschiiSaccharum spontaneum90.2118.4986.8341forward
CNT301916Aegilops tauschiiZea mays29.6327.5291.96112forward
CNT30716253Aegilops tauschiiMalus domestica golden78.8422.4789.26298forward
CNT30479087Aegilops tauschiiArabidopsis halleri18.7824.488.7371forward
CNT30361828Aegilops tauschiiSorghum bicolor80.6958.8886.23305forward
CNT30705326Aegilops tauschiiPrunus avium93.9227.6385.35355forward
CNT3054398Aegilops tauschiiAmborella trichopoda48.4126.6885.25183forward
CNT3024028Aegilops tauschiiPopulus trichocarpa49.7425.4487.23188forward
CNT30119815Aegilops tauschiiCitrus clementina88.6272.9884.18335forward
CNT30557952Aegilops tauschiiPanicum hallii28.3113.1392.52107forward

Expression of CNT30441049

Peptides detected in this lncRNA

>peptide 1 (33 aa)
HDTSVPLKERGGEISSSQAEHDWQAAKSASHAS*

Sequence

>CNT30441049
CACGATACCTCTGTGCCTTTGAAGGAGAGGGGAGGTGAAATATCATCATCTCAAGCAGAGCACGACTGGCAGGCAGCCAAGTCTGCATCACACGCTTCAT
GAGAGCCTTTCCCATCAAGTCCTTCTCATCATTCTTCATGGTCACACCAAGCTTCTTCAACATAGGCCACAACTTCTCCTTCTGATCATTCATGCAGGTG
GCGATGATTTGCTTGATTGGCTCATAGCAGAACTGAACAAAACCTCTCTTGCAGGTAGCTGTCCCAGTGTTCTTGGTGGTCCATTTCTTTGTGGCTGGGT
CAAAGAAGTTCTCACCCCAAAGCCTCTCCATCATCTTCGCCTCATCAACTCCAAACTTGGAGGCATACATCTTAGCGA