Detailed information on CNT30440874


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 2e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674834Aegilops tauschiiSetaria viridis73.5756.0191.09359forward
CNT30405823Aegilops tauschiiBeta vulgaris48.5752.6783.12237forward
CNT30391299Aegilops tauschiiTriticum turgidum73.7765.4596.39360forward
CNT30135610Aegilops tauschiiLolium perenne70.4940.6691.28344forward
CNT30154011Aegilops tauschiiPrunus persica20.735.9487.13101forward

Expression of CNT30440874

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSTTMLGPVVSGPKHQIFLARSLSHPNSSDRILERTLGSSRGPMRPSSIASANPSSNGRASM*

>peptide 2 (49 aa)
REVSLDVVQRGTRPLHLLKHVPSLLIQNTIDTAKCILRGLDLNQPQQSP*

>peptide 3 (29 aa)
MTVRQDFSRTVSRKETTGGETIISAPPMKS

>peptide 4 (36 aa)
MLVGGLAHDSATGLLKNSLTEGDDGRGNNNFSTTHEV

Sequence

>CNT30440874
CGGGAGGTAAGCCTTGATGTTGTACAGCGGGGTACCAGGCCTCTGCATCTCCTCAAACACGTGCCCTCTCTTCTGATTCAGAACACCATAGATACCGCCA
AGTGCATTCTCCGGGGCCTGGATCTCAACCAGCCACAACAGAGTCCTTGATTTCATTCAGATACTGCACTCCCTTACACATGTCAACAACCATGTTGGGG
CCAGTCGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCGAGATCCTTGTCCCACCCAAACTCCTCGGACAGGATCTTGGAGCGAACCTTAGGATCATCAC
GCGGGCCAATGCGGCCATCATCAATAGCCTCAGCCAATCCCTCCTCCAATGGGCGAGCTTCCATGTAAAGACGGTTATGCTTGTTGGGGGACTTGCTCAT
GACAGTGCGACAGGACTTCTCAAGAACAGTCTCACGGAAGGAGACGACGGGAGGGGAAACAATAATTTCAGCACCACCCATGAAGTCC