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Detailed information on CNT30440859


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30301196Aegilops tauschiiTriticum aestivum58.3821.0787.08209forward
CNT30224319Aegilops tauschiiHordeum vulgare39.945.5786.01143forward
CNT30398534Aegilops tauschiiTriticum turgidum74.320.6787.97266reverse complement
CNT30667627Aegilops tauschiiTriticum dicoccoides33.840.8893.39121forward
CNT30687812Aegilops tauschiiTriticum urartu61.7399.5598.19221forward
CNT30578976Aegilops tauschiiEchinochloa crusgalli23.466.6189.2984forward

Expression of CNT30440859

Peptides detected in this lncRNA

>peptide 1 (40 aa)
SVRLISLPFEPNGSNGPLTRALIGGAQPNHGWWAPVTRAI*

Sequence

>CNT30440859
AGTGTTAGGTTGATCTCTCTCCCGTTCGAACCCAACGGGTCGAACGGGCCCCTGACTCGCGCCCTGATCGGGGGCGCTCAACCAAACCATGGTTGGTGGG
CCCCTGTGACCCGCGCTATATAAACAGAGGTGGGGGCCGGGGCACGACTTACGAGGTTAATCGCTGCCACAATCCCCACCGACACTCCCTACCGATCTAG
GGTTAGAGCGGTGCTCACGGGAAGTTCCACCACCGCCGCCATCCACTCTCTGCCATCACCGGCCACCGTCACCATGGCCGGCACCGGGACTTCCTCATCT
GGACAAGCAGAAGGTAGGTTTACCGGATCTAATCTAGCCTAGTGATCCAAGAGACAAT