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Detailed information on CNT30440797


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 8e-109

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532843Aegilops tauschiiEucalyptus grandis30.4930.3387.84222forward
CNT30316236Aegilops tauschiiCorylus avellana33.9353.8183.81247forward
CNT30379936Aegilops tauschiiManihot esculenta34.6275.4587.3252forward
CNT30711584Aegilops tauschiiGlycine max81.8784.6683.22596forward
CNT30552635Aegilops tauschiiOryza glaberrima86.1360.487.72627forward
CNT3059659Aegilops tauschiiArabidopsis lyrata30.0850.4683.11219forward
CNT3014085Aegilops tauschiiZea mays77.4792.4686.52564forward
CNT30107537Aegilops tauschiiOryza longistaminata82.4265.2987.17600forward
CNT30149525Aegilops tauschiiBrachypodium distachyon16.0738.7493.16117forward
CNT30100253Aegilops tauschiiOryza rufipogon86.1356.987.72627forward
CNT30575129Aegilops tauschiiOryza barthii84.4875.5587.48615forward
CNT30497701Aegilops tauschiiDigitaria exilis44.5199.6990.43324forward
CNT30116094Aegilops tauschiiOryza nivara86.1371.2587.72627forward
CNT30604019Aegilops tauschiiOryza punctata46.0299.1192.24335forward
CNT3050899Aegilops tauschiiCucumis sativus17.5850.7982.81128forward

Expression of CNT30440797

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MMSQWSNTHWGKAWPDVAALRVLENPNDSMTGR*

>peptide 2 (79 aa)
MPRMFSSARAPSFDAHWNPATTESLISFRYCTPLHMSTTMLGPVVSGPKHQIFLARSLSHPNSSDRILERTLGSSRGPMR

Sequence

>CNT30440797
GTACATTCCAATAGCAATACAGCGACGACGACTCAATAGACAGATAATAGTGCAGCTCTCTTAGCAGCAAAAGCAAACTAGACCATGTAACAGAAGCAAA
AGTTTAGAGCTTGTCCTCGAAATCAGATAGAGGGGTCATCTGTTCCTTGAGACCCTTGCGCTTGCGGATCTCTGTGACAAGGGTCGCGGACTGGGAGCCG
GCCTCCAAAGGATCAGAAGACATGATGTCCCAATGGTCGAACACACACTGGGGGAAAGCCTGGCCAGATGTCGCCGCCCTGAGGGTACTTGAGAACCCAA
ACGACTCGATGACCGGGAGGTAAGCCTTGATGTTGTACAGCGGGGTACCAGGTACACAGGCTCCAGCAGCCTTGGCTTGGCAGTGAGCTGAGAAGCGTAA
ATGACCCTCCTGGCTGTTGGGATGACCTGACCACCACCCCTGTGAATAGCATCAGTGTGCAGAACAACATCACAGACCTCAAAGCAAATGCCACGCATGT
TCTCCTCAGCCAGAGCACCTTCTTTCGATGCCCATTGGAACCCAGCCACAACAGAGTCCTTGATTTCATTCAGATACTGCACTCCCTTACACATGTCAAC
AACCATGTTGGGGCCAGTCGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCGAGATCCTTGTCCCACCCAAACTCCTCGGACAGGATCTTGGAGCGAACC
TTAGGATCATCACGCGGGCCAATGCGGC