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Detailed information on CNT30440278


BLAST search results

BLAST vs Swiss-Prot:
sp|P08963|CB22_HORVU, E-value = 4e-109

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690525Aegilops tauschiiOryza sativa57.271.3291.49552forward
CNT30552186Aegilops tauschiiOryza glaberrima43.9454.9293.16424forward
CNT30664875Aegilops tauschiiTriticum dicoccoides53.7865.6196.53519forward
CNT30685298Aegilops tauschiiTriticum urartu93.7898.1697.02905forward
CNT30345511Aegilops tauschiiEragrostis tef57.6262.7591.91556forward
CNT30596866Aegilops tauschiiOryza meridionalis53.2654.5193514forward
CNT30574920Aegilops tauschiiOryza barthii57.6262.1291.19556forward
CNT30604622Aegilops tauschiiOryza punctata56.9959.5992.18550forward

Expression of CNT30440278

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (52 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLASFASGELRLTVGL*

>peptide 3 (95 aa)
MAWTKKPNMENMARRPFLISFTLSSAKASGPPSLKIWEPALNHTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADRPAVSQP*

Sequence

>CNT30440278
AACCAAGGAGTTAAGCAGAAGAACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAACTC
CTCATCTCGAATCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGC
ATCCATCAGCCATGAAGTTGTCGGCCTAGAGGTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGG
GGTCGGCGAGGTGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTT
CTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGGGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCACACGGCCTCGCCGAACTTGACG
CCGTTGCGGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAACGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCT
CGGGGTCGGCCGACAGGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGCGGGTCGCCGGAGAGCGGGCCGAGGTAGAG
CACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCCCCGAAGGGCGCCGCC
CTGGAGGCCTTCACAGGTGTGCCCGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTACTCGCTAGCTTTGCTTCGGGCG
AGCTGAGGCTGACAGTAGGACTGTAGGAGGCGCTGGTGGTCGTTGGAGCTGTGGAGTGAAGCCGG