Detailed information on CNT30439866


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521912Aegilops tauschiiSetaria italica59.3441.5785.31143reverse complement
CNT30179302Aegilops tauschiiSecale cereale63.923.9196.75154forward
CNT30308436Aegilops tauschiiTriticum aestivum98.7633.4794.54238reverse complement
CNT30401480Aegilops tauschiiTriticum turgidum98.3432.8794.51237reverse complement
CNT30667262Aegilops tauschiiTriticum dicoccoides27.393310066reverse complement
CNT3017917Aegilops tauschiiZea mays100.415.8386.78242forward
CNT30232563Aegilops tauschiiAnanas comosus59.754.289.58144forward
CNT30689283Aegilops tauschiiTriticum urartu100.419.5498.35242forward
CNT30149997Aegilops tauschiiBrachypodium distachyon21.5816.3596.1552forward
CNT30604150Aegilops tauschiiOryza punctata100.8344.8386.42243reverse complement

Expression of CNT30439866

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKINRILFYFFFSSNPKNFSFLYIGRRFGIG*

Sequence

>CNT30439866
CTAGTTAATAATTTCAATTTCATTAAGAAAAACTAACTAAATAAATGGAAAATGAAAATTAATAGAATTCTTTTTTATTTTTTTTTTTCTTCAAATCCAA
AAAATTTCTCTTTTTTATACATAGGTCGTCGATTCGGCATTGGTTAAAAAAGGGCAGGGTGCCCCCTTTTTTTTTTCTATAAATAGTTCAAACCATTTTA
TCGATATGAGTGTTCTATATCAGATAAATTTTACATTAGCT